Detailed information NTG1144558

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: C7R97_RS10465
• Genome accession: NZ_LT592161
• Coordinates: 1794612..1795865 (-)
• Length: 417 a.a.
• NCBI ID: WP_047921365.1
• Uniprot ID: -
• Organism: Neisseria gonorrhoeae strain WHO_Y
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1789612..1800865

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C7R97_RS14000	-	1789685..1790092 (+)	408	Protein_1822	pilin	-
C7R97_RS10430 (WHOY_01980)	-	1790426..1790824 (+)	399	Protein_1823	pilin	-
C7R97_RS10435 (WHOY_01981)	-	1791362..1791760 (+)	399	Protein_1824	pilin	-
C7R97_RS10440 (WHOY_01982)	-	1791964..1792350 (+)	387	Protein_1825	pilin	-
C7R97_RS10450 (WHOY_01983)	lpxC	1792853..1793776 (+)	924	WP_003687007.1	UDP-3-O-acyl-N-acetylglucosamine deacetylase	-
C7R97_RS10460 (WHOY_01984)	-	1793905..1794309 (+)	405	Protein_1827	pilin	-
C7R97_RS10465 (WHOY_01985C)	pilA	1794612..1795865 (-)	1254	WP_047921365.1	signal recognition particle-docking protein FtsY	Machinery gene
C7R97_RS10470 (WHOY_01986)	msrAB	1796011..1797579 (+)	1569	WP_003694393.1	bifunctional peptide-methionine (S)-S-oxide reductase MsrA/peptide-methionine (R)-S-oxide reductase MsrB	-
C7R97_RS10475 (WHOY_01987C)	-	1797663..1798148 (-)	486	WP_003687001.1	CinA family protein	-
C7R97_RS10480 (WHOY_01988C)	-	1798174..1799022 (-)	849	WP_003687000.1	mechanosensitive ion channel family protein	-
C7R97_RS10485 (WHOY_01989C)	-	1799116..1800117 (-)	1002	WP_003691948.1	thiamine ABC transporter substrate-binding protein	-

Sequence

Protein

• Length: 417 a.a.
• Molecular weight: 44431.78 Da
• Isoelectric Point: 4.7680

>NTDB_id=1144558 C7R97_RS10465 WP_047921365.1 1794612..1795865(-) (pilA) [Neisseria gonorrhoeae strain WHO_Y]
MFSFFRRKKKQETPALEEAQVQETAAKVESEVAQIVGNIKEDVESLAESVKGRAESAVETVSGAVEQVKETVAEMPSEAG
EAAERVESAKEAVAETVGEAVGQVQEAVATTEEHKLGWAARLKQGLAKSRDKMAKSLAGVFGGGQIGEDLYEELETVLIT
GDMGMEATEYLMKDVRDRVSLKGLKDGNELRGALKEALYDLIKPLEKPLVLPETKEPFVIMLAGINGAGKTTSIGKLAKY
FQAQGKSVLLAAGDTFRAAAREQLQAWGERNNVTVISQTAGDSAAVCFDAVQAAKARGIDIVLADTAGRLPTQLHLMEEI
KKVKRVLQKAIPGAPHEIIVVLDANIGQNAVNQVKAFDDALGLTGLIVTKLDGTAKGGILAALASDRPVPVRYIGVGEGI
DDLRPFDARAFVDALLD

Nucleotide

• Length: 1254 bp

>NTDB_id=1144558 C7R97_RS10465 WP_047921365.1 1794612..1795865(-) (pilA) [Neisseria gonorrhoeae strain WHO_Y]
ATGTTCAGCTTCTTCCGTCGCAAGAAAAAACAGGAAACGCCGGCTCTCGAGGAGGCCCAAGTTCAGGAAACCGCAGCAAA
AGTAGAATCTGAAGTTGCTCAAATAGTTGGAAATATTAAAGAAGATGTCGAATCTTTAGCAGAAAGCGTCAAAGGGCGGG
CCGAATCTGCCGTTGAAACCGTCAGCGGTGCGGTTGAACAGGTAAAGGAAACCGTTGCCGAGATGCCGTCTGAAGCAGGG
GAAGCGGCGGAACGCGTTGAATCCGCAAAAGAAGCTGTTGCCGAAACCGTCGGCGAGGCTGTCGGGCAAGTTCAAGAAGC
CGTTGCGACAACTGAAGAACACAAGCTCGGTTGGGCTGCGCGTTTGAAACAAGGCTTGGCCAAATCACGCGACAAAATGG
CGAAATCGCTGGCCGGCGTGTTCGGCGGCGGACAAATCGGCGAGGATTTGTACGAAGAGCTGGAAACCGTGCTGATTACC
GGCGATATGGGCATGGAGGCCACCGAATACCTGATGAAAGACGTGCGCGACCGCGTCAGCCTCAAAGGGCTGAAAGACGG
CAACGAATTGCGCGGCGCGTTGAAAGAAGCCTTGTACGACCTGATTAAGCCGTTGGAAAAACCGCTGGTCTTGCCCGAAA
CTAAAGAGCCTTTCGTGATTATGCTTGCCGGTATCAACGGCGCGGGCAAAACCACGTCTATCGGCAAACTCGCCAAATAT
TTCCAAGCGCAGGGCAAATCCGTATTGCTGGCGGCAGGCGATACTTTCCGCGCCGCCGCGCGCGAGCAGCTTCAGGCTTG
GGGCGAACGCAACAATGTAACCGTCATTTCACAAACTGCGGGCGATTCCGCCGCCGTGTGCTTCGATGCCGTCCAAGCCG
CGAAAGCGCGCGGGATCGACATCGTGCTTGCCGACACCGCCGGCCGCCTGCCCACGCAGCTTCATTTGATGGAAGAAATC
AAAAAAGTGAAGCGCGTGCTGCAAAAAGCCATTCCCGGCGCGCCGCACGAAATCATCGTCGTACTCGATGCCAATATCGG
GCAAAACGCCGTCAACCAAGTCAAAGCCTTTGACGACGCATTGGGGCTGACGGGGCTTATCGTTACCAAACTCGACGGCA
CGGCAAAAGGCGGCATCCTCGCCGCGCTTGCTTCCGACCGCCCCGTCCCCGTCCGCTACATCGGCGTGGGCGAAGGCATA
GACGACCTGCGCCCGTTTGACGCGCGCGCGTTTGTGGACGCACTGCTGGATTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (217-416)

• SRP54-type protein, helical bundle domain (SRP54_N) (132-198)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	99.281	100	0.993