Detailed information NTG1144467

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: C7S06_RS10280
• Genome accession: NZ_LT592157
• Coordinates: 1738841..1740094 (-)
• Length: 417 a.a.
• NCBI ID: WP_047919725.1
• Uniprot ID: A0AAX2TQK3
• Organism: Neisseria gonorrhoeae strain WHO P
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1733841..1745094

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C7S06_RS10230 (WHOP_01913)	lpxC	1734369..1735292 (+)	924	WP_003687007.1	UDP-3-O-acyl-N-acetylglucosamine deacetylase	-
C7S06_RS10240 (WHOP_01914)	-	1735420..1735817 (+)	398	Protein_1760	pilin	-
C7S06_RS10265 (WHOP_01915)	-	1736873..1737388 (+)	516	Protein_1761	pilin	-
C7S06_RS10275 (WHOP_01916)	-	1737801..1738577 (+)	777	WP_144895438.1	opacity family porin	-
C7S06_RS10280 (WHOP_01917C)	pilA	1738841..1740094 (-)	1254	WP_047919725.1	signal recognition particle-docking protein FtsY	Machinery gene
C7S06_RS10285 (WHOP_01918)	msrAB	1740240..1741808 (+)	1569	WP_003687002.1	bifunctional peptide-methionine (S)-S-oxide reductase MsrA/peptide-methionine (R)-S-oxide reductase MsrB	-
C7S06_RS10290 (WHOP_01919C)	-	1741892..1742374 (-)	483	WP_003694396.1	CinA family protein	-
C7S06_RS10295 (WHOP_01920C)	-	1742401..1743249 (-)	849	WP_003687000.1	mechanosensitive ion channel family protein	-
C7S06_RS10300 (WHOP_01921C)	-	1743343..1744344 (-)	1002	WP_003691948.1	thiamine ABC transporter substrate-binding protein	-

Sequence

Protein

• Length: 417 a.a.
• Molecular weight: 44359.71 Da
• Isoelectric Point: 4.8123

>NTDB_id=1144467 C7S06_RS10280 WP_047919725.1 1738841..1740094(-) (pilA) [Neisseria gonorrhoeae strain WHO P]
MFSFFRRKKKQETPALEEAQVQETAAKVESEVAQIVGNIKEDVESLAESVKGRAESAVETVSGAVEQVKETVAEMPSEAG
EAAERVESAKEAVAETVGEAVGQVQEAVATTEEHKLGWAARLKQGLAKSRDKMAKSLAGVFGGGQIGEDLYEELETVLIT
GDMGMEATEYLMKDVRDRVSLKGLKDGNELRGALKEALYDLIKPLEKPLVLPETKEPFVIMLAGINGAGKTTSIGKLAKY
FQAQGKSVLLAAGDTFRAAAREQLQAWGGRNNVTVISQTAGDSAAVCFDAVQAAKARGIDIVLADTAGRLPTQLHLMEEI
KKVKRVLQKAIPGAPHEIIVVLDANIGQNAVNQVKAFDDALGLTGLIVTKLDGTAKGGILAALASDRPVPVRYIGVGEGI
DDLRPFDARAFVDALLD

Nucleotide

• Length: 1254 bp

>NTDB_id=1144467 C7S06_RS10280 WP_047919725.1 1738841..1740094(-) (pilA) [Neisseria gonorrhoeae strain WHO P]
ATGTTCAGCTTCTTCCGTCGCAAGAAAAAACAGGAAACGCCGGCTCTCGAGGAGGCCCAAGTTCAGGAAACCGCAGCAAA
AGTAGAATCTGAAGTTGCTCAAATAGTTGGAAATATTAAAGAAGATGTCGAATCTTTAGCAGAAAGCGTCAAAGGGCGGG
CCGAATCTGCCGTTGAAACCGTCAGCGGTGCGGTTGAACAGGTAAAGGAAACCGTTGCCGAGATGCCGTCTGAAGCAGGG
GAAGCGGCGGAACGCGTTGAATCCGCAAAAGAAGCTGTTGCCGAAACCGTCGGCGAGGCTGTCGGGCAAGTTCAAGAAGC
CGTTGCGACAACTGAAGAACACAAGCTCGGTTGGGCTGCGCGTTTGAAACAAGGCTTGGCCAAATCACGCGACAAAATGG
CGAAATCGCTGGCCGGCGTGTTCGGCGGCGGACAAATCGGCGAGGATTTGTACGAAGAGCTGGAAACCGTGCTGATTACC
GGCGATATGGGCATGGAGGCCACCGAATACCTGATGAAAGACGTGCGCGACCGCGTCAGCCTCAAAGGGCTGAAAGACGG
CAACGAATTGCGCGGCGCGTTGAAAGAAGCCTTGTACGACCTGATTAAGCCGTTGGAAAAACCGCTGGTCTTGCCCGAAA
CTAAAGAGCCTTTCGTGATTATGCTTGCCGGTATCAACGGCGCGGGCAAAACCACGTCTATCGGCAAACTCGCCAAATAT
TTCCAAGCGCAGGGCAAATCCGTATTGCTGGCGGCAGGCGATACCTTCCGCGCCGCCGCGCGCGAGCAGCTTCAGGCTTG
GGGCGGGCGCAACAATGTGACCGTGATTTCACAAACTGCGGGCGATTCCGCCGCCGTGTGCTTCGATGCCGTCCAAGCCG
CGAAAGCGCGCGGGATCGACATCGTGCTTGCCGACACCGCCGGCCGCCTGCCCACGCAGCTTCATTTGATGGAAGAAATC
AAAAAAGTGAAGCGCGTGCTGCAAAAAGCCATTCCCGGCGCGCCGCACGAAATTATCGTCGTACTCGATGCCAATATCGG
GCAAAACGCCGTCAACCAAGTCAAAGCCTTTGACGACGCATTGGGGCTGACGGGGCTTATCGTTACCAAACTCGACGGCA
CGGCAAAAGGCGGCATCCTCGCCGCGCTTGCTTCCGACCGCCCCGTCCCCGTCCGCTACATCGGCGTGGGCGAAGGCATA
GACGACCTGCGCCCGTTTGACGCGCGCGCGTTTGTGGACGCACTGCTGGATTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (217-416)

• SRP54-type protein, helical bundle domain (SRP54_N) (132-198)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	99.52	100	0.995