Detailed information    

insolico Bioinformatically predicted

Overview


Name   ceuB   Type   Machinery gene
Locus tag   CJH_RS06690 Genome accession   NZ_CP006851
Coordinates   1286603..1287571 (+) Length   322 a.a.
NCBI ID   WP_004297618.1    Uniprot ID   -
Organism   Campylobacter jejuni subsp. jejuni F38011     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 1281603..1292571
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CJH_RS06665 (CJH_06755) cdsA 1282512..1283237 (-) 726 WP_041160210.1 phosphatidate cytidylyltransferase -
  CJH_RS06670 (CJH_06760) - 1283247..1283585 (-) 339 WP_002852397.1 hypothetical protein -
  CJH_RS06675 (CJH_06765) - 1283587..1284894 (-) 1308 WP_002864240.1 NFACT family protein -
  CJH_RS06680 (CJH_06770) mobA 1284956..1285531 (+) 576 WP_002867312.1 molybdenum cofactor guanylyltransferase -
  CJH_RS06685 (CJH_06775) pldA 1285528..1286517 (+) 990 WP_002864239.1 phospholipase A -
  CJH_RS06690 (CJH_06780) ceuB 1286603..1287571 (+) 969 WP_004297618.1 ABC transporter permease Machinery gene
  CJH_RS06695 (CJH_06785) ceuC 1287564..1288502 (+) 939 WP_002854141.1 iron chelate uptake ABC transporter family permease subunit -
  CJH_RS06700 (CJH_06790) ceuD 1288499..1289254 (+) 756 WP_002858409.1 ABC transporter ATP-binding protein -
  CJH_RS06705 (CJH_06795) ceuB 1289267..1290259 (+) 993 WP_002898681.1 enterochelin ABC transporter substrate-binding protein CeuB -
  CJH_RS06710 (CJH_06800) - 1290417..1290638 (+) 222 WP_041160211.1 hypothetical protein -
  CJH_RS06715 (CJH_06805) - 1290639..1290920 (+) 282 WP_041160212.1 type II toxin-antitoxin system RelE/ParE family toxin -
  CJH_RS06725 (CJH_06815) - 1291143..1291373 (-) 231 WP_041160213.1 hypothetical protein -
  CJH_RS06730 (CJH_06820) - 1291604..1291972 (+) 369 WP_041160214.1 hypothetical protein -
  CJH_RS06735 (CJH_06825) - 1292076..1292315 (+) 240 WP_002874728.1 hypothetical protein -
  CJH_RS09310 (CJH_06830) - 1292328..1292468 (+) 141 WP_002874727.1 hypothetical protein -

Sequence


Protein


Download         Length: 322 a.a.        Molecular weight: 35451.37 Da        Isoelectric Point: 9.6678

>NTDB_id=114437 CJH_RS06690 WP_004297618.1 1286603..1287571(+) (ceuB) [Campylobacter jejuni subsp. jejuni F38011]
MFFKHILSLKVLIALLLFFGMISLFIGVISINVKDILNLNSTQLEIITLTRIPRLIAILLTGMSLSICGLIMQQLTQNKF
VSPTTAGTMDCAKFGILISLIFFTGASFFTQAIIASIFALLGSFIFIQILRKIKLKDVIFVPLIGLMFGGIISAITTFFA
YALNYIQNIQGWLQGSMANVMQGNYELLYISLPLFILAYFLAHKITIVGMGEDIALNLGISYNGILFLGLIIVSIITSLV
IVSVGIIPFLGLIIPNLVALYLGDNLRKNLIYIALCGALFLLVCDIISRLVIFPFEMPLSITTGVLGSLIFIFLLLKRKV
YA

Nucleotide


Download         Length: 969 bp        

>NTDB_id=114437 CJH_RS06690 WP_004297618.1 1286603..1287571(+) (ceuB) [Campylobacter jejuni subsp. jejuni F38011]
TTGTTTTTTAAGCATATATTGAGTTTAAAAGTGCTTATAGCTTTACTTTTATTCTTTGGAATGATAAGTTTATTTATAGG
AGTTATCAGTATCAATGTAAAAGATATTCTTAATCTTAACTCCACTCAACTAGAAATCATAACTCTCACAAGAATTCCTA
GACTTATAGCGATTTTACTCACAGGAATGAGTCTTAGTATATGTGGGCTTATCATGCAACAACTCACGCAAAATAAATTC
GTTTCCCCAACTACAGCAGGGACCATGGATTGTGCTAAATTTGGCATACTTATTTCTTTAATATTTTTTACTGGAGCGTC
TTTTTTCACTCAAGCTATCATTGCTTCTATATTTGCACTTTTGGGTTCTTTTATATTTATCCAAATTTTAAGAAAAATCA
AACTCAAAGATGTGATTTTTGTACCTTTGATAGGCTTGATGTTTGGAGGTATTATTAGTGCTATAACCACTTTTTTTGCC
TATGCTTTAAATTATATACAAAATATCCAAGGTTGGCTACAAGGCAGTATGGCAAATGTTATGCAGGGAAATTATGAATT
GCTCTACATTTCTTTACCACTTTTTATACTTGCTTATTTTTTAGCTCATAAAATCACCATAGTTGGCATGGGTGAAGATA
TAGCTTTAAATCTTGGAATTTCTTATAATGGTATATTATTTTTAGGCTTAATAATTGTAAGCATTATCACTAGCTTAGTG
ATTGTAAGCGTTGGGATTATCCCTTTTTTAGGGCTAATTATCCCAAATTTAGTAGCTCTTTATCTAGGTGATAATCTTAG
AAAAAATCTTATCTATATAGCACTTTGTGGAGCTTTGTTTTTACTTGTTTGCGATATCATTTCAAGACTTGTTATCTTTC
CTTTTGAAATGCCTTTAAGTATCACTACAGGTGTTTTAGGGTCTTTAATCTTTATCTTTCTTTTACTAAAAAGGAAAGTT
TATGCGTAA

Domains


Predicted by InterproScan.

(15-317)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

98.758

100

0.988


Multiple sequence alignment