Detailed information NTG1144288

Bioinformatically predicted

Overview

• Name: pilC
• Type: Machinery gene
• Locus tag: C7S08_RS00360
• Genome accession: NZ_LT592150
• Coordinates: 53282..56443 (-)
• Length: 1053 a.a.
• NCBI ID: WP_115095440.1
• Uniprot ID: -
• Organism: Neisseria gonorrhoeae strain WHO_V
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 48282..61443

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C7S08_RS00320 (WHOV_00050C)	-	49546..49935 (-)	390	WP_003687278.1	endonuclease domain-containing protein	-
C7S08_RS00325 (WHOV_00051C)	-	50098..50477 (-)	380	Protein_49	VOC family protein	-
C7S08_RS00330 (WHOV_00052C)	carA	50531..51664 (-)	1134	WP_003700860.1	glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit	-
C7S08_RS00360 (WHOV_00053C)	pilC	53282..56443 (-)	3162	WP_115095440.1	PilC family type IV pilus tip adhesin	Machinery gene
C7S08_RS00385 (WHOV_00054C)	apbC	58136..59215 (-)	1080	WP_003699443.1	iron-sulfur cluster carrier protein ApbC	-
C7S08_RS00395 (WHOV_00056)	-	59589..60098 (+)	510	WP_003687293.1	protein disulfide oxidoreductase	-
C7S08_RS00405 (WHOV_00058)	nadR	60439..60879 (+)	441	WP_003687296.1	MarR family adhesin repressor NadR	-

Sequence

Protein

• Length: 1053 a.a.
• Molecular weight: 115748.84 Da
• Isoelectric Point: 9.8399

>NTDB_id=1144288 C7S08_RS00360 WP_115095440.1 53282..56443(-) (pilC) [Neisseria gonorrhoeae strain WHO_V]
MNKTLKRRVFRHTALYAAILMFSHTGGGGGQAQAQTYKYAIVMNERKQPEVKWESQYNQSALKDKGRERTFSHTSQKNRF
GITSNFISFNNNDELVSQQSGTAVFGTATYLPPYGKVSGFDTAELNKRGNAVNWIHTTRPGLAGYGYDGIRCGSAQDCPK
LTYKTRFSFDNPDLVKTRGGLDRHTEPSRENSPIYKLKDHPWLGVSFNLGGEGTAKDGRSSSKLVSSFDENNSNSNQNLV
YTTEGHRISLGNWQRETTAMAYYLNAKLHLLDKKQIKDIAQGKTVRLGVLKPSIDVKTQNTGLSGLLNFWSKWDIKDNGQ
IPVKLGLPQVKAVRCTNTAHPNKTAQAPSPALTAPALWFGPVQNGKVQMYSASVSTYPGSSSSRIFLQELKTQTDPARPG
RHSLAALDTQNIKSREPNFNSRQTVIRLPGGVYKINPGKNGGRVAGINGNDGKNDTFGIFKDRYVTPETDEWSEVLLPWT
ARYYGNDDIFKTFNQPNNKKQSDKKQYSQKYRIRTKEDDNDKPRDLGDIVNSPIVAVDGYLATSANDGMVHIFKKTGTDE
RSYNLKLSYIPGTMERKDIEGNDSDLAKELRTFAEKGYVGDRYGVDGGFVLRRITDDQDKQKHFFMFGAMGLGGRGAYAL
DLSKIDSSNLTGVSMFDVQNDKNNNKNDNNRVKLGYTVGTPQIGKTQNGKYAAFLASGYAAKDINSNDNKTALYVYDLEN
GSGSLIKKIEAPSGKGGLSSPTLVDKDLDGIVDIAYAGDRGGNMYRFDLSNSDPSKWSVSTIFEGGKPITSAPAVSRLAD
KRVVIFGTGSDLSEEDVVGTNPQYIYGIFDDDKGTVKVTVQNGTGGGLLEQVLSEENKTLFLNKRSDGSNGKGWVVRLRE
GERVTVKPTVVLRTAFVTIRKYTDTDKCGAQTAILGINTADGGALTPRSARPIVPEANKDVAQYSGHKTAGGKSVPIGCM
WKNSKTVCPNGYVYDKPVNVRYLDEKKTDDFPVTADGDAGGSGTFKEGKKPARNNRCFSGKGVRTLLMNDLDSLDITGPM
CGIKRLSWREVFF

Nucleotide

• Length: 3162 bp

>NTDB_id=1144288 C7S08_RS00360 WP_115095440.1 53282..56443(-) (pilC) [Neisseria gonorrhoeae strain WHO_V]
ATGAATAAAACTTTAAAAAGGCGGGTTTTCCGCCATACCGCGCTTTATGCCGCCATCTTGATGTTTTCCCATACCGGCGG
GGGGGGGGGGCAGGCGCAGGCGCAAACGTATAAATACGCTATTGTGATGAACGAGCGAAAGCAGCCCGAGGTAAAGTGGG
AGAGTCAATATAATCAATCAGCATTAAAGGACAAAGGCAGGGAGCGGACATTTAGCCATACGAGCCAGAAAAACAGATTC
GGCATCACAAGCAATTTTATCTCATTCAACAATAACGATGAGCTTGTTTCTCAACAAAGCGGTACTGCCGTTTTTGGCAC
AGCCACCTACCTGCCGCCCTACGGCAAGGTTTCCGGCTTTGATACCGCCGAGCTGAACAAGCGCGGCAATGCCGTCAATT
GGATTCATACCACCCGGCCCGGGCTGGCAGGCTACGGCTACGACGGTATCCGTTGCGGAAGTGCCCAAGACTGTCCCAAA
CTTACCTATAAAACCCGATTTTCCTTCGATAATCCCGACTTGGTAAAAACAAGAGGCGGGCTGGATAGGCACACAGAGCC
AAGCCGCGAAAATTCGCCCATTTACAAATTGAAGGATCATCCATGGTTGGGCGTGTCTTTCAATTTGGGCGGCGAGGGTA
CCGCCAAAGATGGCAGATCATCCAGCAAATTGGTATCTTCTTTTGATGAAAACAATAGTAATAGTAATCAAAACCTCGTC
TATACGACAGAAGGCCACCGTATTTCCCTTGGCAACTGGCAGCGCGAAACGACCGCCATGGCCTATTATCTGAACGCCAA
GCTGCACCTGCTGGACAAAAAACAGATTAAAGATATCGCCCAAGGCAAAACAGTGCGGTTGGGTGTCTTGAAGCCGAGCA
TCGATGTGAAGACACAAAATACGGGGCTTAGCGGCTTGCTAAATTTTTGGTCTAAGTGGGACATTAAAGATAACGGGCAG
ATTCCGGTCAAGCTCGGCCTGCCGCAAGTCAAAGCCGTGCGCTGCACCAACACCGCCCACCCCAATAAAACAGCCCAAGC
CCCTTCGCCGGCACTGACCGCCCCCGCGCTGTGGTTCGGCCCTGTGCAAAATGGTAAGGTGCAGATGTATTCCGCTTCGG
TTTCCACCTACCCCGGCAGTTCGAGCAGCCGCATCTTCCTCCAAGAGCTGAAAACTCAAACCGACCCCGCCCGGCCCGGC
CGGCATTCCCTCGCCGCTTTGGATACGCAGAACATCAAAAGCCGCGAGCCGAATTTCAACTCAAGGCAGACCGTGATCCG
ATTGCCGGGCGGCGTGTACAAGATCAACCCGGGCAAGAACGGCGGCCGGGTCGCGGGTATTAATGGCAATGACGGCAAAA
ACGACACTTTCGGCATCTTCAAGGACAGGTATGTCACACCTGAGACCGACGAGTGGAGCGAAGTGCTGCTGCCTTGGACG
GCCCGGTATTACGGTAATGACGATATATTTAAAACATTCAACCAACCAAACAACAAAAAACAAAGCGACAAAAAACAATA
CAGCCAAAAATACCGCATCCGCACAAAAGAAGATGACAATGACAAACCCCGCGATTTGGGCGACATCGTCAACAGCCCGA
TTGTCGCGGTCGACGGGTATCTGGCAACTTCTGCCAACGACGGGATGGTGCATATCTTCAAAAAAACCGGCACGGATGAA
CGCAGCTACAATCTGAAGCTCAGCTACATCCCCGGTACGATGGAGCGTAAGGATATTGAAGGCAATGACTCCGACCTCGC
CAAAGAGCTGCGCACCTTTGCCGAAAAAGGCTATGTGGGCGACCGCTACGGCGTGGACGGCGGCTTTGTCTTGCGCCGCA
TTACAGATGACCAAGACAAGCAAAAACATTTCTTTATGTTTGGTGCGATGGGCCTTGGCGGCAGAGGCGCGTATGCCTTG
GATTTAAGCAAAATCGACAGCAGCAACCTGACCGGCGTTTCCATGTTTGATGTCCAAAACGACAAAAATAACAATAAGAA
TGACAATAATCGCGTGAAATTAGGCTACACCGTCGGTACGCCGCAAATCGGCAAAACCCAAAACGGCAAATACGCCGCCT
TCCTCGCCTCCGGTTATGCGGCTAAAGACATTAACAGCAACGACAATAAAACCGCGCTGTATGTGTATGATTTGGAAAAC
GGCAGTGGTAGTCTGATTAAAAAAATCGAAGCACCCAGCGGCAAGGGCGGGCTTTCGTCCCCCACGCTGGTGGATAAAGA
TTTGGACGGCATTGTCGATATCGCCTATGCCGGCGACCGGGGCGGGAATATGTACCGCTTTGATTTGAGCAATTCCGATC
CTAGTAAATGGTCTGTAAGCACTATTTTCGAAGGCGGGAAGCCGATTACCTCCGCGCCCGCCGTTTCCCGACTGGCAGAC
AAACGCGTGGTCATCTTCGGCACGGGCAGCGATTTGAGTGAAGAGGATGTAGTCGGTACGAATCCACAATATATTTACGG
TATCTTTGACGACGATAAGGGGACGGTTAAGGTAACGGTACAAAACGGCACGGGAGGCGGGTTGCTCGAGCAAGTGCTTA
GCGAGGAAAATAAAACATTATTCCTGAACAAGAGATCCGACGGATCGAACGGCAAAGGGTGGGTAGTGAGATTGAGGGAA
GGAGAACGCGTTACCGTCAAACCGACCGTGGTATTGCGTACCGCCTTCGTGACCATCCGGAAATATACGGATACGGACAA
ATGTGGCGCGCAAACCGCCATTTTGGGCATCAATACCGCCGACGGCGGCGCATTGACTCCGAGAAGCGCGCGCCCGATTG
TGCCGGAAGCCAATAAGGATGTCGCACAATATTCCGGCCATAAGACAGCCGGCGGCAAGTCCGTCCCCATAGGCTGCATG
TGGAAAAACAGCAAAACCGTCTGCCCGAACGGATATGTTTACGACAAGCCGGTTAATGTGCGCTACCTGGACGAAAAGAA
AACAGACGATTTCCCCGTCACGGCAGACGGTGATGCAGGCGGCAGCGGAACATTCAAAGAGGGTAAAAAACCCGCCCGCA
ATAACCGGTGCTTCTCCGGAAAAGGTGTGCGCACCCTGCTGATGAACGATTTGGACAGCTTGGATATTACCGGCCCGATG
TGCGGTATCAAACGCTTAAGCTGGCGCGAAGTCTTCTTCTGA

Domains

Predicted by InterproScan.

• Neisseria PilC beta-propeller domain (T4P_PilY1) (540-863)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilC	Neisseria meningitidis A1493	70.472	100	0.709