Detailed information
Bioinformatically predicted
Overview
| Name | pilN | Type | Machinery gene |
| Locus tag | WHOZ_RS00675 | Genome accession | NZ_LT592146 |
| Coordinates | 106481..107080 (-) | Length | 199 a.a. |
| NCBI ID | WP_003687354.1 | Uniprot ID | A0AA44U8R8 |
| Organism | Neisseria gonorrhoeae strain WHO O | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 101481..112080
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| WHOZ_RS00660 (WHOO_00100C) | pilQ | 103056..105251 (-) | 2196 | WP_003687350.1 | type IV pilus secretin PilQ | Machinery gene |
| WHOZ_RS00665 (WHOO_00101C) | pilP | 105270..105815 (-) | 546 | WP_003692554.1 | pilus assembly protein PilP | Machinery gene |
| WHOZ_RS00670 (WHOO_00102C) | - | 105833..106480 (-) | 648 | WP_003690570.1 | type 4a pilus biogenesis protein PilO | - |
| WHOZ_RS00675 (WHOO_00103C) | pilN | 106481..107080 (-) | 600 | WP_003687354.1 | PilN domain-containing protein | Machinery gene |
| WHOZ_RS00680 (WHOO_00104C) | pilM | 107083..108198 (-) | 1116 | WP_003687356.1 | type IV pilus biogenesis protein PilM | - |
| WHOZ_RS00685 (WHOO_00105) | - | 108350..110746 (+) | 2397 | WP_003690571.1 | penicillin-binding protein 1A | - |
| WHOZ_RS00690 (WHOO_00106C) | yihA | 110866..111495 (-) | 630 | WP_003687358.1 | ribosome biogenesis GTP-binding protein YihA/YsxC | - |
Sequence
Protein
Download Length: 199 a.a. Molecular weight: 22183.53 Da Isoelectric Point: 9.8898
>NTDB_id=1144242 WHOZ_RS00675 WP_003687354.1 106481..107080(-) (pilN) [Neisseria gonorrhoeae strain WHO O]
MNNLIKINLLPYREEMNKRKQQQFKTLMYGAVLTGVAAVAATYLFIDNMINKQSEKNTLLEISIAHLDTELSEIQKLKQE
KDAFLIKKNKIGELQIKRLQAAKILDSLNEAVPGSTYLTSLDAVTADSYRLSGRTSSDNRVAAMMRAMPNTGIFKQPELL
SIKKNNSHQEFTLQATLQPIVKAAESKENPASGNAQEAN
MNNLIKINLLPYREEMNKRKQQQFKTLMYGAVLTGVAAVAATYLFIDNMINKQSEKNTLLEISIAHLDTELSEIQKLKQE
KDAFLIKKNKIGELQIKRLQAAKILDSLNEAVPGSTYLTSLDAVTADSYRLSGRTSSDNRVAAMMRAMPNTGIFKQPELL
SIKKNNSHQEFTLQATLQPIVKAAESKENPASGNAQEAN
Nucleotide
Download Length: 600 bp
>NTDB_id=1144242 WHOZ_RS00675 WP_003687354.1 106481..107080(-) (pilN) [Neisseria gonorrhoeae strain WHO O]
ATGAACAATTTAATCAAAATCAACCTCCTCCCCTACAGGGAAGAGATGAACAAACGCAAACAGCAGCAGTTTAAAACGCT
GATGTACGGCGCCGTGCTGACGGGCGTTGCCGCCGTTGCGGCAACCTACCTGTTTATCGACAATATGATCAATAAACAGT
CGGAAAAAAACACGCTGCTGGAAATCTCCATCGCACACTTGGATACCGAGCTGTCGGAAATACAAAAGCTCAAACAGGAA
AAAGATGCCTTCCTGATTAAGAAAAACAAAATCGGGGAGCTCCAGATCAAACGCCTCCAAGCCGCAAAAATCCTCGACAG
CCTGAATGAGGCCGTCCCCGGAAGCACCTACCTAACCTCGCTGGATGCCGTTACCGCCGACTCTTATCGGCTCAGCGGCA
GGACATCCAGCGACAACCGCGTTGCCGCCATGATGAGGGCGATGCCCAATACCGGCATATTCAAGCAACCCGAATTGTTA
AGCATCAAGAAAAACAATTCGCATCAAGAATTTACCCTTCAGGCAACATTACAACCTATCGTAAAGGCGGCCGAATCCAA
AGAGAATCCGGCTTCGGGAAACGCACAGGAGGCAAACTGA
ATGAACAATTTAATCAAAATCAACCTCCTCCCCTACAGGGAAGAGATGAACAAACGCAAACAGCAGCAGTTTAAAACGCT
GATGTACGGCGCCGTGCTGACGGGCGTTGCCGCCGTTGCGGCAACCTACCTGTTTATCGACAATATGATCAATAAACAGT
CGGAAAAAAACACGCTGCTGGAAATCTCCATCGCACACTTGGATACCGAGCTGTCGGAAATACAAAAGCTCAAACAGGAA
AAAGATGCCTTCCTGATTAAGAAAAACAAAATCGGGGAGCTCCAGATCAAACGCCTCCAAGCCGCAAAAATCCTCGACAG
CCTGAATGAGGCCGTCCCCGGAAGCACCTACCTAACCTCGCTGGATGCCGTTACCGCCGACTCTTATCGGCTCAGCGGCA
GGACATCCAGCGACAACCGCGTTGCCGCCATGATGAGGGCGATGCCCAATACCGGCATATTCAAGCAACCCGAATTGTTA
AGCATCAAGAAAAACAATTCGCATCAAGAATTTACCCTTCAGGCAACATTACAACCTATCGTAAAGGCGGCCGAATCCAA
AGAGAATCCGGCTTCGGGAAACGCACAGGAGGCAAACTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilN | Neisseria meningitidis strain C311 |
97.487 |
100 |
0.975 |