Detailed information NTG1144138

Bioinformatically predicted

Overview

• Name: pilC
• Type: Machinery gene
• Locus tag: C7R98_RS11275
• Genome accession: NZ_LT591904
• Coordinates: 1887875..1890970 (+)
• Length: 1031 a.a.
• NCBI ID: WP_106176321.1
• Uniprot ID: -
• Organism: Neisseria gonorrhoeae strain WHO M
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1882875..1895970

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C7R98_RS11245 (WHOM_02076C)	-	1883573..1884022 (-)	450	WP_003688065.1	CopD family copper resistance protein	-
C7R98_RS11250 (WHOM_02077C)	waaA	1884063..1885334 (-)	1272	WP_010360974.1	lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase	-
C7R98_RS11255 (WHOM_02078C)	gnd	1885397..1886845 (-)	1449	WP_003688061.1	decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase	-
C7R98_RS11260 (WHOM_02079C)	-	1886925..1887188 (-)	264	WP_017147189.1	hypothetical protein	-
C7R98_RS11275 (WHOM_02080)	pilC	1887875..1890970 (+)	3096	WP_106176321.1	PilC family type IV pilus tip adhesin	Machinery gene
C7R98_RS11295 (WHOM_02082)	-	1891953..1892237 (+)	285	WP_003692093.1	GIY-YIG nuclease family protein	-
C7R98_RS11305 (WHOM_02083C)	yccS	1892863..1895013 (-)	2151	WP_003694501.1	YccS family putative transporter	-

Sequence

Protein

• Length: 1031 a.a.
• Molecular weight: 112622.64 Da
• Isoelectric Point: 9.8436

>NTDB_id=1144138 C7R98_RS11275 WP_106176321.1 1887875..1890970(+) (pilC) [Neisseria gonorrhoeae strain WHO M]
MNKTLKRQVFRHTALYTAILMFSHTGGGGGQAQARDYAIVMNGRNQPEVRSNVPFSIKDKDRKREYTHHRNKTGGGSVSF
DNSDTLVSQQSGIVVFGTATYLPPYGKVSGFDTAELNKRGNAVNWIHTTRPGLAGYSYADVICRDITGCPQLVYETKFAF
GQQGLQRKGNKLDIYEDKSRENSPIYKLKDHPWLGVSFNLGSENTVKNSKSFNKLISSFSEDNNNQTIVSTTRDHPISLG
DQQREHTAVAYYLNAKLHLLDKKQIENIAPGKTVDLGTLRPRVETIRRGFLSYWASWKIEDKGNITVRLGLPEVKAGRCI
NEPNPNPKSKALSPALTAPALWFGPGQDGKAEMYSASVSTYPGSSSSKIFLQNLSRNDDKNKPGRYSLKPLSENEIKSKE
PRFNGRQTVIRLDSGVQLIKLNGSKDEVVTFGNTGNNGTFGIVKEANVNLNADEWKKVLLPWTVRGPDNDNKFKSINREP
DKYSQRYRIRENGNRDLGDIVNSPITAVGGYLATAANDGMVHIFKKTGTDERGYELKLSYIPGTMPRQYFDNDTSALKDS
TLAQELRTFAEKGYVGDRYGVDGGFVLRQVELRGQKHVFMFGAMGFGGRGAYALDLSKINGNYPAAAPLFDVKNGDNNGK
NGKNRVEVELGYTVGTPQIGKTQNGKYAAFLASGYAAKQIASQENKTALYVYDLGNGSGSLIKKIEVQGGKGGLSSPTLV
DKDLDGIVDIAYAGDRGGNMYRFDLSDNDPNKWSVRTIFQGAKPITSAPAVSRLKDKRVVIFGTGSDLTEEDVLNTDEQY
IYGIFDDDKAANNVNASRGVLGSGLLEQNLTQENKTLFLNKRSDGSGSKGWAVKLTGGQRVTVKPTVVLRTAFVTIRSYT
GTDKCGAQTAILGINTADGGALTPRSARPIVPEANTAVAQYSGHKKTAGGKSVPIGCMDKGGKTVCPNGYVYDKPVNVRY
LDETETDGFSTTADGDAGGSGIDPAGRRPGKNNRCFSKKGVRTLLMNDLDSLDITGPMCGIKRLSWREVFF

Nucleotide

• Length: 3096 bp

>NTDB_id=1144138 C7R98_RS11275 WP_106176321.1 1887875..1890970(+) (pilC) [Neisseria gonorrhoeae strain WHO M]
ATGAATAAAACTTTGAAACGGCAGGTTTTCCGCCATACCGCGCTTTATACCGCCATCTTGATGTTTTCCCATACCGGCGG
GGGGGGGGGGCAGGCGCAAGCCCGTGACTACGCTATTGTCATGAACGGGCGAAACCAGCCCGAGGTAAGGTCGAATGTGC
CATTTTCAATAAAGGACAAAGACAGGAAGCGCGAATATACTCATCATAGGAACAAAACAGGAGGAGGCTCTGTCTCATTC
GACAATAGCGATACCCTTGTTTCCCAACAAAGCGGTATTGTCGTTTTTGGCACAGCCACCTACCTGCCGCCCTACGGCAA
GGTTTCCGGCTTTGATACCGCCGAGCTGAACAAGCGCGGCAATGCCGTCAATTGGATTCATACCACCCGGCCCGGGCTGG
CAGGCTACAGCTACGCCGATGTCATATGCAGAGACATCACAGGCTGTCCCCAACTTGTCTATGAGACCAAATTTGCCTTC
GGTCAACAAGGGTTGCAAAGAAAGGGCAACAAGCTGGATATATACGAAGACAAAAGCCGCGAAAATTCGCCCATTTACAA
ATTGAAGGATCATCCCTGGTTGGGCGTGTCTTTCAATTTGGGCAGCGAGAATACCGTCAAAAATAGCAAATCATTCAACA
AATTGATATCTTCTTTTAGTGAAGACAATAATAATCAAACCATCGTCTCTACGACACGAGACCACCCTATTTCCCTTGGC
GACCAGCAGCGCGAACATACCGCCGTGGCCTATTATCTGAACGCCAAACTGCACCTGCTGGATAAAAAACAGATTGAAAA
TATCGCGCCAGGCAAAACAGTGGATTTGGGCACCTTGAGACCGCGCGTCGAGACGATAAGACGAGGCTTTCTAAGTTATT
GGGCTTCGTGGAAGATTGAAGATAAAGGGAACATTACAGTCCGCCTCGGCCTGCCGGAAGTCAAAGCAGGCCGCTGCATC
AACGAACCGAACCCCAATCCCAAATCCAAAGCCCTTTCGCCGGCACTGACCGCCCCCGCGTTGTGGTTCGGACCTGGGCA
AGATGGTAAGGCGGAGATGTATTCCGCTTCGGTTTCCACCTACCCCGGCAGTTCGAGCAGCAAAATTTTCCTGCAAAACC
TTTCCCGCAATGATGACAAAAACAAACCGGGCCGCTATTCCCTCAAACCCTTGAGTGAGAATGAGATTAAAAGTAAAGAG
CCGCGTTTCAACGGAAGGCAGACCGTCATCCGATTGGATAGCGGCGTACAGCTGATCAAACTGAATGGAAGCAAGGATGA
GGTCGTCACTTTTGGAAACACCGGCAACAACGGCACTTTCGGCATTGTTAAGGAAGCGAACGTCAATCTTAACGCCGACG
AGTGGAAAAAAGTGCTGCTGCCTTGGACGGTTCGGGGTCCCGATAATGACAATAAATTTAAATCAATTAACCGAGAACCA
GACAAATACAGCCAAAGATACCGCATCCGCGAAAACGGCAATCGCGATTTGGGCGACATCGTCAACAGCCCGATAACGGC
GGTCGGCGGGTATTTGGCAACCGCCGCGAACGACGGGATGGTGCATATCTTCAAAAAAACCGGCACGGATGAACGAGGCT
ACGAACTGAAGCTCAGCTACATCCCCGGCACGATGCCGCGCCAATATTTTGATAACGACACTTCCGCTCTCAAAGACTCC
ACCCTCGCCCAAGAGCTGCGCACCTTTGCCGAAAAAGGCTATGTGGGCGACCGCTACGGCGTGGACGGCGGCTTTGTCTT
GCGCCAAGTCGAACTGCGCGGGCAAAAACACGTGTTTATGTTCGGCGCAATGGGTTTTGGCGGCAGGGGCGCGTATGCCT
TGGATTTAAGCAAAATCAACGGAAATTATCCGGCCGCCGCCCCCCTGTTTGATGTCAAAAATGGCGATAATAACGGCAAA
AACGGCAAAAATCGCGTGGAAGTGGAATTAGGCTACACCGTCGGCACGCCGCAAATCGGCAAAACCCAAAACGGCAAATA
CGCCGCCTTCCTCGCCTCCGGTTATGCGGCTAAACAAATTGCCAGCCAAGAAAATAAAACCGCGCTGTATGTGTATGATT
TGGGAAACGGCAGTGGTAGTCTGATTAAAAAAATCGAAGTGCAGGGCGGCAAGGGCGGGCTTTCGTCCCCCACGCTGGTG
GATAAAGATTTGGACGGCATTGTCGATATCGCCTATGCCGGCGACCGGGGCGGGAATATGTACCGCTTTGATTTGAGCGA
CAACGACCCGAACAAATGGTCTGTACGCACTATTTTCCAAGGCGCAAAACCGATTACTTCCGCGCCCGCCGTTTCCCGAC
TGAAAGACAAACGCGTGGTTATCTTCGGCACGGGCAGCGATTTGACCGAAGAAGATGTACTGAATACGGACGAACAATAT
ATTTACGGCATCTTCGACGACGATAAGGCGGCGAATAATGTAAATGCAAGCCGCGGCGTTTTGGGGAGCGGGCTGCTCGA
GCAAAACCTTACGCAGGAAAATAAAACATTATTCCTGAACAAGAGATCCGACGGTTCGGGCAGCAAGGGCTGGGCGGTGA
AATTGACAGGCGGACAACGCGTTACCGTCAAACCGACCGTGGTATTGCGTACCGCCTTTGTCACCATCCGCAGCTATACG
GGCACGGACAAATGCGGCGCGCAAACCGCCATTTTGGGCATCAATACCGCCGACGGCGGCGCATTGACTCCGAGAAGCGC
GCGCCCGATTGTGCCGGAAGCCAATACGGCTGTCGCACAATATTCCGGCCATAAGAAAACCGCCGGCGGCAAGTCCGTCC
CTATAGGTTGTATGGACAAAGGCGGCAAAACCGTCTGCCCGAACGGATATGTTTACGACAAGCCGGTTAATGTGCGTTAC
CTGGATGAAACGGAAACAGACGGATTTTCAACGACGGCGGACGGCGATGCGGGCGGCAGCGGTATAGACCCCGCCGGCAG
GCGTCCCGGCAAAAACAACCGCTGCTTCTCCAAAAAAGGTGTGCGCACCCTGCTGATGAACGATTTGGACAGCTTGGATA
TTACCGGCCCGATGTGCGGTATCAAACGCTTAAGCTGGCGCGAAGTCTTCTTCTGA

Domains

Predicted by InterproScan.

• Neisseria PilC beta-propeller domain (T4P_PilY1) (497-840)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilC	Neisseria meningitidis A1493	74.667	100	0.76