Detailed information NTG1144074

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: C7S00_RS08505
• Genome accession: NZ_LT591901
• Coordinates: 1470929..1472182 (-)
• Length: 417 a.a.
• NCBI ID: WP_047920694.1
• Uniprot ID: -
• Organism: Neisseria gonorrhoeae strain WHO L
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1465929..1477182

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C7S00_RS08460	-	1466482..1467710 (-)	1229	Protein_1461	multidrug effflux MFS transporter	-
C7S00_RS08470 (WHOL_01595C)	-	1467826..1468701 (-)	876	WP_003693582.1	DMT family transporter	-
C7S00_RS08475 (WHOL_01596)	-	1468884..1469279 (+)	396	Protein_1463	pilin	-
C7S00_RS08495 (WHOL_01598)	-	1469882..1470661 (+)	780	Protein_1464	opacity family porin	-
C7S00_RS08500 (WHOL_01599C)	-	1470635..1470922 (-)	288	WP_144961320.1	hypothetical protein	-
C7S00_RS08505 (WHOL_01600C)	pilA	1470929..1472182 (-)	1254	WP_047920694.1	signal recognition particle-docking protein FtsY	Machinery gene
C7S00_RS08510 (WHOL_01601)	msrAB	1472328..1473896 (+)	1569	WP_003696503.1	bifunctional peptide-methionine (S)-S-oxide reductase MsrA/peptide-methionine (R)-S-oxide reductase MsrB	-
C7S00_RS08515 (WHOL_01602C)	-	1473980..1474462 (-)	483	WP_003694396.1	CinA family protein	-
C7S00_RS08520 (WHOL_01603C)	-	1474488..1475336 (-)	849	WP_003687000.1	mechanosensitive ion channel family protein	-
C7S00_RS08525 (WHOL_01604C)	-	1475430..1476431 (-)	1002	WP_003691948.1	thiamine ABC transporter substrate-binding protein	-

Sequence

Protein

• Length: 417 a.a.
• Molecular weight: 44317.68 Da
• Isoelectric Point: 4.8618

>NTDB_id=1144074 C7S00_RS08505 WP_047920694.1 1470929..1472182(-) (pilA) [Neisseria gonorrhoeae strain WHO L]
MFSFFRRKKKQETPALEEAQVQETAAKVESEVAQIVGNIKEDVESLAESVKGRAESAVETVSGAVEQVKETVAEMPSEAG
EAAERVESAKEAVAETVGEAVGQVQEAVATTEEHKLGWAARLKQGLAKSRDKMAKSLAGVFGGGQIGEDLYEELETVLIT
GDMGMDATEYLMKDVRGRVSLKGLKDGNELRGALKEALYDLIKPLEKPLVLPETKEPFVIMLAGINGAGKTTSIGKLAKY
FQAQGKSVLLAAGDTFRAAAREQLQAWGGRNNVTVISQTTGDSAAVCFDAVQAAKARGIDIVLADTAGRLPTQLHLMEEI
KKVKRVLQKAIPGAPHEIIVVLDANIGQNAVNQVKAFDDALGLTGLIVTKLDGTAKGGILAALASDRPVPVRYIGVGEGI
DDLRPFDARAFVDALLD

Nucleotide

• Length: 1254 bp

>NTDB_id=1144074 C7S00_RS08505 WP_047920694.1 1470929..1472182(-) (pilA) [Neisseria gonorrhoeae strain WHO L]
ATGTTCAGCTTCTTCCGTCGCAAGAAAAAACAGGAAACGCCGGCTCTCGAGGAGGCCCAAGTTCAGGAAACCGCAGCAAA
AGTAGAATCTGAAGTTGCTCAAATAGTTGGAAATATTAAAGAAGATGTCGAATCTTTAGCAGAAAGCGTCAAAGGGCGGG
CCGAATCTGCCGTTGAAACCGTCAGCGGTGCGGTTGAACAGGTAAAGGAAACCGTTGCCGAGATGCCGTCTGAAGCAGGG
GAAGCGGCGGAACGCGTTGAATCCGCAAAAGAAGCTGTTGCCGAAACCGTCGGCGAGGCTGTCGGGCAAGTTCAAGAAGC
CGTTGCGACAACTGAAGAACACAAGCTCGGTTGGGCTGCGCGTTTGAAACAAGGCTTGGCCAAATCACGCGACAAAATGG
CGAAATCGCTGGCCGGCGTGTTCGGCGGCGGACAAATCGGCGAGGATTTGTACGAAGAGCTGGAAACCGTGCTGATTACC
GGCGATATGGGCATGGATGCCACCGAATACCTGATGAAAGACGTGCGCGGCCGCGTCAGCCTCAAAGGGCTGAAAGACGG
CAACGAATTGCGCGGCGCGTTGAAAGAAGCCTTGTACGACCTGATTAAGCCGTTGGAAAAACCGCTGGTCTTGCCCGAAA
CTAAAGAGCCTTTCGTGATTATGCTTGCCGGTATCAACGGCGCGGGCAAAACCACGTCTATCGGCAAACTCGCCAAATAT
TTCCAAGCGCAGGGCAAATCCGTATTGCTGGCGGCGGGCGATACCTTCCGCGCCGCCGCCCGTGAGCAGCTTCAGGCTTG
GGGCGGGCGCAACAATGTAACCGTCATTTCACAAACCACGGGCGATTCCGCCGCCGTGTGCTTCGATGCCGTCCAAGCCG
CCAAAGCGCGCGGGATCGACATCGTGCTTGCCGACACCGCCGGCCGCCTGCCCACGCAGCTTCATTTGATGGAAGAAATC
AAAAAAGTGAAGCGCGTGCTGCAAAAAGCCATTCCCGGCGCGCCGCACGAAATTATCGTCGTACTCGATGCCAATATCGG
GCAAAACGCCGTCAACCAAGTCAAAGCCTTTGACGACGCATTGGGGCTGACGGGGCTTATCGTTACCAAACTCGACGGCA
CGGCAAAAGGCGGCATCCTCGCCGCGCTTGCTTCCGACCGCCCCGTCCCCGTCCGCTACATCGGCGTGGGCGAAGGCATA
GACGACCTGCGCCCGTTTGACGCGCGCGCGTTTGTGGACGCACTGCTGGATTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (217-416)

• SRP54-type protein, helical bundle domain (SRP54_N) (132-198)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	99.76	100	0.998