Detailed information    

insolico Bioinformatically predicted

Overview


Name   recX   Type   Regulator
Locus tag   C7S05_RS06430 Genome accession   NZ_LT591897
Coordinates   1106155..1106616 (+) Length   153 a.a.
NCBI ID   WP_003688187.1    Uniprot ID   A0AA44U815
Organism   Neisseria gonorrhoeae strain WHO F     
Function   inhibition of RecA (predicted from homology)   
Competence regulation

Genomic Context


Location: 1101155..1111616
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C7S05_RS06400 (WHOF_01212C) - 1101188..1102402 (-) 1215 WP_003690983.1 pyridoxal phosphate-dependent aminotransferase -
  C7S05_RS06405 (WHOF_01213C) - 1102491..1102700 (-) 210 WP_003688192.1 tautomerase family protein -
  C7S05_RS06410 (WHOF_01214) - 1102892..1103698 (+) 807 WP_047924050.1 DUF4198 domain-containing protein -
  C7S05_RS14985 (WHOF_01216C) - 1103758..1104977 (-) 1220 Protein_1129 Glu/Leu/Phe/Val family dehydrogenase -
  C7S05_RS06425 (WHOF_01219) - 1105372..1106082 (+) 711 WP_003688188.1 phosphoglycolate phosphatase -
  C7S05_RS06430 (WHOF_01220) recX 1106155..1106616 (+) 462 WP_003688187.1 recombination regulator RecX Regulator
  C7S05_RS06435 (WHOF_01221) - 1106690..1106851 (+) 162 WP_010358395.1 hypothetical protein -
  C7S05_RS06445 (WHOF_01222) - 1107004..1107486 (+) 483 WP_003688183.1 acyl-CoA thioesterase -
  C7S05_RS06450 (WHOF_01223C) - 1107884..1108897 (-) 1014 WP_020996850.1 peptidoglycan DD-metalloendopeptidase family protein -
  C7S05_RS06455 (WHOF_01224C) surE 1108999..1109745 (-) 747 WP_003690973.1 5'/3'-nucleotidase SurE -
  C7S05_RS06460 (WHOF_01225C) - 1109762..1111318 (-) 1557 WP_047924054.1 TerC family protein -

Sequence


Protein


Download         Length: 153 a.a.        Molecular weight: 17745.13 Da        Isoelectric Point: 10.4361

>NTDB_id=1143974 C7S05_RS06430 WP_003688187.1 1106155..1106616(+) (recX) [Neisseria gonorrhoeae strain WHO F]
MKPQKSLRARAMDILSRQEVSRIGLKRKLAPHAESEEELENVLNEFAERNWQSDLRYAEAYIRSKSRKHGSLRLKQALAQ
QGIDEKTSRNLLPDRSSEKQAAIAVLRKKFKHPAANLKEKQKQARFLAYRGFDADTVQTALKHAWDENWEDSC

Nucleotide


Download         Length: 462 bp        

>NTDB_id=1143974 C7S05_RS06430 WP_003688187.1 1106155..1106616(+) (recX) [Neisseria gonorrhoeae strain WHO F]
ATGAAACCGCAAAAATCCCTACGCGCCCGCGCGATGGACATCCTCTCGCGCCAAGAAGTCAGCCGCATCGGTCTGAAACG
CAAACTTGCACCGCACGCCGAAAGCGAAGAGGAGTTGGAAAACGTGTTAAACGAATTTGCCGAACGCAACTGGCAGTCGG
ATTTGCGCTACGCCGAAGCCTATATCCGCAGCAAAAGCCGCAAACACGGTTCATTGAGGCTGAAACAGGCTTTGGCGCAA
CAGGGCATAGATGAAAAAACCAGCCGCAACCTGCTTCCCGACCGCTCAAGCGAAAAGCAAGCCGCCATAGCCGTGTTGCG
TAAAAAATTCAAACATCCCGCCGCCAACCTCAAAGAAAAACAAAAACAGGCGCGTTTCCTCGCCTATCGCGGTTTTGATG
CCGATACCGTTCAGACGGCATTGAAACACGCTTGGGACGAAAATTGGGAAGACAGCTGCTGA

Domains


Predicted by InterproScan.

(30-143)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Neisseria gonorrhoeae strain FA1090

100

100

1


Multiple sequence alignment