Detailed information
Bioinformatically predicted
Overview
| Name | pilN | Type | Machinery gene |
| Locus tag | C7S05_RS00620 | Genome accession | NZ_LT591897 |
| Coordinates | 107101..107700 (-) | Length | 199 a.a. |
| NCBI ID | WP_003687354.1 | Uniprot ID | A0AA44U8R8 |
| Organism | Neisseria gonorrhoeae strain WHO F | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 102101..112700
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C7S05_RS00605 (WHOF_00101C) | pilQ | 103700..105871 (-) | 2172 | WP_047924206.1 | type IV pilus secretin PilQ | Machinery gene |
| C7S05_RS00610 (WHOF_00102C) | pilP | 105890..106435 (-) | 546 | WP_003687351.1 | pilus assembly protein PilP | Machinery gene |
| C7S05_RS00615 (WHOF_00103C) | - | 106453..107100 (-) | 648 | WP_003690570.1 | type 4a pilus biogenesis protein PilO | - |
| C7S05_RS00620 (WHOF_00104C) | pilN | 107101..107700 (-) | 600 | WP_003687354.1 | PilN domain-containing protein | Machinery gene |
| C7S05_RS00625 (WHOF_00105C) | pilM | 107703..108818 (-) | 1116 | WP_003696683.1 | type IV pilus biogenesis protein PilM | - |
| C7S05_RS00630 (WHOF_00106) | - | 108970..111366 (+) | 2397 | WP_003687357.1 | penicillin-binding protein 1A | - |
| C7S05_RS00635 (WHOF_00107C) | yihA | 111487..112116 (-) | 630 | WP_003687358.1 | ribosome biogenesis GTP-binding protein YihA/YsxC | - |
Sequence
Protein
Download Length: 199 a.a. Molecular weight: 22183.53 Da Isoelectric Point: 9.8898
>NTDB_id=1143952 C7S05_RS00620 WP_003687354.1 107101..107700(-) (pilN) [Neisseria gonorrhoeae strain WHO F]
MNNLIKINLLPYREEMNKRKQQQFKTLMYGAVLTGVAAVAATYLFIDNMINKQSEKNTLLEISIAHLDTELSEIQKLKQE
KDAFLIKKNKIGELQIKRLQAAKILDSLNEAVPGSTYLTSLDAVTADSYRLSGRTSSDNRVAAMMRAMPNTGIFKQPELL
SIKKNNSHQEFTLQATLQPIVKAAESKENPASGNAQEAN
MNNLIKINLLPYREEMNKRKQQQFKTLMYGAVLTGVAAVAATYLFIDNMINKQSEKNTLLEISIAHLDTELSEIQKLKQE
KDAFLIKKNKIGELQIKRLQAAKILDSLNEAVPGSTYLTSLDAVTADSYRLSGRTSSDNRVAAMMRAMPNTGIFKQPELL
SIKKNNSHQEFTLQATLQPIVKAAESKENPASGNAQEAN
Nucleotide
Download Length: 600 bp
>NTDB_id=1143952 C7S05_RS00620 WP_003687354.1 107101..107700(-) (pilN) [Neisseria gonorrhoeae strain WHO F]
ATGAACAATTTAATCAAAATCAACCTCCTCCCCTACAGGGAAGAGATGAACAAACGCAAACAGCAGCAGTTTAAAACGCT
GATGTACGGCGCCGTGCTGACGGGCGTTGCCGCCGTTGCGGCAACCTACCTGTTTATCGACAATATGATCAATAAACAGT
CGGAAAAAAACACGCTGCTGGAAATCTCCATCGCACACTTGGATACCGAGCTGTCGGAAATACAAAAGCTCAAACAGGAA
AAAGATGCCTTCCTGATTAAGAAAAACAAAATCGGGGAGCTCCAGATCAAACGCCTCCAAGCCGCAAAAATCCTCGACAG
CCTGAATGAGGCCGTCCCCGGAAGCACCTACCTAACCTCGCTGGATGCCGTTACCGCCGACTCTTATCGGCTCAGCGGCA
GGACATCCAGCGACAACCGCGTTGCCGCCATGATGAGGGCGATGCCCAATACCGGCATATTCAAGCAACCCGAATTGTTA
AGCATCAAGAAAAACAATTCGCATCAAGAATTTACCCTTCAGGCAACATTACAACCTATCGTAAAGGCGGCCGAATCCAA
AGAGAATCCGGCTTCGGGAAACGCACAGGAGGCAAACTGA
ATGAACAATTTAATCAAAATCAACCTCCTCCCCTACAGGGAAGAGATGAACAAACGCAAACAGCAGCAGTTTAAAACGCT
GATGTACGGCGCCGTGCTGACGGGCGTTGCCGCCGTTGCGGCAACCTACCTGTTTATCGACAATATGATCAATAAACAGT
CGGAAAAAAACACGCTGCTGGAAATCTCCATCGCACACTTGGATACCGAGCTGTCGGAAATACAAAAGCTCAAACAGGAA
AAAGATGCCTTCCTGATTAAGAAAAACAAAATCGGGGAGCTCCAGATCAAACGCCTCCAAGCCGCAAAAATCCTCGACAG
CCTGAATGAGGCCGTCCCCGGAAGCACCTACCTAACCTCGCTGGATGCCGTTACCGCCGACTCTTATCGGCTCAGCGGCA
GGACATCCAGCGACAACCGCGTTGCCGCCATGATGAGGGCGATGCCCAATACCGGCATATTCAAGCAACCCGAATTGTTA
AGCATCAAGAAAAACAATTCGCATCAAGAATTTACCCTTCAGGCAACATTACAACCTATCGTAAAGGCGGCCGAATCCAA
AGAGAATCCGGCTTCGGGAAACGCACAGGAGGCAAACTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilN | Neisseria meningitidis strain C311 |
97.487 |
100 |
0.975 |