Detailed information    

insolico Bioinformatically predicted

Overview

Name   recG   Type   Machinery gene
Locus tag   A8Q77_RS05080 Genome accession   NZ_LT571436
Coordinates   1099405..1101444 (-) Length   679 a.a.
NCBI ID   WP_064130614.1    Uniprot ID   -
Organism   Neisseria weaveri strain NCTC13585     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1094405..1106444
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A8Q77_RS05060 (SAMEA3174300_01008) purE 1094571..1095059 (+) 489 WP_064130613.1 5-(carboxyamino)imidazole ribonucleotide mutase -
  A8Q77_RS05065 (SAMEA3174300_01009) ribF 1095322..1096251 (-) 930 WP_004284224.1 bifunctional riboflavin kinase/FAD synthetase -
  A8Q77_RS05070 (SAMEA3174300_01010) - 1096563..1097312 (+) 750 WP_036494849.1 amino acid ABC transporter permease -
  A8Q77_RS05075 (SAMEA3174300_01011) - 1097379..1098650 (-) 1272 WP_231987893.1 tetratricopeptide repeat protein -
  A8Q77_RS10555 (SAMEA3174300_01012) - 1099070..1099243 (-) 174 WP_156503411.1 tetratricopeptide repeat protein -
  A8Q77_RS05080 (SAMEA3174300_01013) recG 1099405..1101444 (-) 2040 WP_064130614.1 ATP-dependent DNA helicase RecG Machinery gene
  A8Q77_RS05085 (SAMEA3174300_01014) lysM 1101634..1102110 (-) 477 WP_004284214.1 peptidoglycan-binding protein LysM -
  A8Q77_RS05090 (SAMEA3174300_01015) - 1102283..1102963 (+) 681 WP_064130615.1 sulfite exporter TauE/SafE family protein -
  A8Q77_RS05095 (SAMEA3174300_01016) - 1103026..1103835 (-) 810 WP_036494852.1 sulfite exporter TauE/SafE family protein -
  A8Q77_RS05100 (SAMEA3174300_01017) pssA 1103925..1104671 (-) 747 WP_004284211.1 CDP-diacylglycerol--serine O-phosphatidyltransferase -
  A8Q77_RS05105 (SAMEA3174300_01018) - 1104829..1105677 (+) 849 WP_050809994.1 mechanosensitive ion channel family protein -
  A8Q77_RS05110 (SAMEA3174300_01019) - 1105792..1106130 (+) 339 WP_004286151.1 carbohydrate porin -

Sequence

Protein


Download         Length: 679 a.a.        Molecular weight: 75461.19 Da        Isoelectric Point: 7.5660

>NTDB_id=1143798 A8Q77_RS05080 WP_064130614.1 1099405..1101444(-) (recG) [Neisseria weaveri strain NCTC13585]
MTPEHQKLLKITDTAAKKLDKLNLHTPWDVALHLPLRYEDETHIMPIKDAPIGVPCQVEGVVTLQEVQFKPRKQLVVQIQ
DDSGSVLFLRFIHFYPSHQKQMAQGKRIRAVGEIKHGFYGDEMIHPKIRDADNSSLAESLTPVYPTVNGLNQPTLRRIVQ
TALEALPLHDTLPDELLGRLKLPHLAESLRLLHAPPPDYSIRQLSDGTLPAWQRLKFDELLAQQLSMRLARQKRISGQAA
PLHGTGEWSGKLLNALPFSLTQAQQRVLTEIRADMQQTHPMHRLLQGDVGSGKTIVAALAALTAIEAGSQVAVMAPTEIL
AEQHYLKFKQWFEPLGLSVAWLSGSQRKKAKEQNKAALSDGLAPIAVGTHALFQEDVQFHNLGLVIVDEQHRFGVAQRLA
LKNKGQDVHQLMMSATPIPRTLAMSFFADLDVSVINELPPNRTPIQTRLVNSLRRAEVEGFVLNTCRKGRQVYWVCPLIE
ESETLQLQTATETQAALQTALPELSIGLVHGRMKAAEKAQVMAEFAAGRLNVLVATTVIEVGVDVPNASLMVIEHAERMG
LAQLHQLRGRVGRGAAASTCVLLFAEPLSELAKARLKVIYEHTDGFEIARQDLNIRGPGEFLGARQSGVPMLRFANLEED
LHLLEKAREIAPQLIEERPDIVEAHLNRWLASREGYLGV

Nucleotide


Download         Length: 2040 bp        

>NTDB_id=1143798 A8Q77_RS05080 WP_064130614.1 1099405..1101444(-) (recG) [Neisseria weaveri strain NCTC13585]
ATGACACCCGAACACCAAAAGCTGCTCAAAATCACCGACACCGCCGCTAAAAAGCTCGACAAGCTCAACCTGCACACCCC
GTGGGACGTTGCCCTGCACCTGCCGCTGCGCTACGAAGACGAAACCCACATCATGCCGATTAAAGACGCACCTATCGGCG
TGCCGTGCCAAGTCGAAGGCGTAGTAACCCTGCAAGAAGTACAGTTCAAACCGCGCAAGCAGCTTGTCGTGCAGATTCAA
GACGACTCCGGCAGCGTGCTGTTTCTGCGCTTCATCCACTTCTACCCCAGCCATCAAAAACAAATGGCGCAAGGCAAACG
CATCCGCGCCGTGGGCGAAATCAAACACGGTTTTTACGGCGACGAAATGATCCACCCCAAAATCCGCGATGCCGACAACA
GCAGCCTTGCCGAAAGCCTTACCCCCGTTTACCCCACCGTAAACGGCCTCAACCAACCCACCTTGCGCCGCATCGTTCAG
ACGGCCTTAGAAGCCCTGCCCCTGCACGACACCCTGCCCGACGAACTCCTAGGCCGTCTGAAACTGCCGCACTTGGCCGA
AAGCCTGCGCCTATTGCACGCCCCGCCGCCCGATTACAGCATCCGCCAACTTTCAGACGGCACCCTCCCCGCATGGCAGC
GGCTCAAATTCGACGAACTGCTCGCCCAACAGCTCTCCATGCGGCTCGCCCGGCAAAAACGCATCAGCGGGCAGGCCGCC
CCCCTGCACGGCACCGGCGAATGGTCGGGCAAACTGCTCAACGCCCTGCCCTTTTCCCTCACCCAAGCCCAACAGCGCGT
GCTGACCGAAATCCGTGCCGACATGCAGCAAACCCACCCCATGCACCGCCTGCTGCAAGGCGACGTAGGCAGCGGCAAAA
CCATCGTTGCCGCCCTAGCCGCCCTCACCGCCATCGAAGCCGGCAGCCAAGTTGCCGTGATGGCACCCACCGAAATCCTC
GCCGAACAGCACTACCTCAAATTCAAACAATGGTTCGAGCCGCTCGGCCTCAGCGTTGCATGGCTTTCCGGCAGCCAGCG
CAAAAAAGCCAAAGAACAAAACAAAGCCGCCCTTTCAGACGGCCTCGCCCCCATCGCCGTCGGCACCCACGCCCTCTTTC
AAGAAGACGTACAGTTCCACAACCTCGGCCTCGTTATCGTCGACGAACAGCACCGCTTCGGCGTCGCCCAACGCCTCGCC
CTCAAAAACAAAGGCCAAGACGTACACCAGCTCATGATGTCCGCCACCCCCATCCCCCGCACGCTGGCCATGAGCTTTTT
CGCCGACCTCGACGTTTCCGTCATCAACGAACTGCCGCCCAACCGCACCCCCATCCAAACCCGCCTCGTCAACAGCCTGC
GCCGCGCCGAAGTCGAAGGCTTCGTACTCAACACCTGCCGCAAAGGACGGCAGGTTTACTGGGTCTGCCCTCTCATCGAA
GAAAGCGAAACCCTGCAACTGCAAACCGCCACCGAAACCCAAGCCGCCCTTCAAACCGCCCTACCCGAACTCAGCATCGG
CCTAGTCCACGGCCGCATGAAAGCCGCCGAAAAAGCCCAAGTGATGGCCGAATTTGCCGCAGGCCGTCTGAACGTACTCG
TTGCCACCACCGTTATCGAAGTCGGCGTAGACGTACCCAACGCCAGCCTCATGGTTATCGAACACGCCGAACGCATGGGC
TTGGCGCAACTGCACCAACTGCGCGGACGCGTAGGCCGCGGAGCCGCCGCCAGCACCTGCGTCTTACTCTTCGCCGAACC
CCTGAGCGAGCTGGCCAAAGCCCGCCTCAAAGTCATCTACGAACACACCGACGGCTTCGAAATCGCCCGCCAAGACCTCA
ACATCCGCGGCCCCGGCGAATTTCTCGGCGCACGCCAAAGCGGCGTACCCATGCTCCGCTTCGCCAACCTCGAAGAAGAC
CTGCACCTACTAGAAAAAGCCCGCGAAATCGCCCCCCAACTGATTGAAGAACGCCCCGACATCGTCGAAGCCCACCTCAA
CCGCTGGCTGGCGAGCAGGGAGGGTTATTTGGGGGTTTGA

Domains

Predicted by InterproScan.

ATP-dependent DNA helicase RecG, domain 3, C-terminal (RecG_dom3_C)

(603-665)

Helicase conserved C-terminal domain (Helicase_C)

(466-574)

RecG wedge domain (RecG_wedge)

(12-164)

DEAD/DEAH box helicase (DEAD)

(263-418)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recG Neisseria meningitidis strain C311

83.358

100

0.834

Multiple sequence alignment