Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   BJR96_RS04170 Genome accession   NZ_LT545678
Coordinates   766501..767310 (+) Length   269 a.a.
NCBI ID   WP_001289498.1    Uniprot ID   X5KFV3
Organism   Streptococcus agalactiae isolate SA111     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 761501..772310
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BJR96_RS04145 (SA111_00822) - 761830..762525 (-) 696 WP_000173639.1 amino acid ABC transporter permease -
  BJR96_RS04150 (SA111_00823) - 762538..763338 (-) 801 WP_000946171.1 transporter substrate-binding domain-containing protein -
  BJR96_RS04155 (SA111_00824) - 763350..764105 (-) 756 WP_000053145.1 amino acid ABC transporter ATP-binding protein -
  BJR96_RS04160 (SA111_00825) vicR 764445..765155 (+) 711 WP_000722052.1 response regulator YycF Regulator
  BJR96_RS04165 (SA111_00826) vicK 765148..766497 (+) 1350 WP_001065469.1 cell wall metabolism sensor histidine kinase VicK Regulator
  BJR96_RS04170 (SA111_00827) vicX 766501..767310 (+) 810 WP_001289498.1 MBL fold metallo-hydrolase Regulator
  BJR96_RS04175 (SA111_00828) - 767313..767681 (+) 369 WP_000719384.1 YbaN family protein -
  BJR96_RS04180 (SA111_00829) rnc 767857..768543 (+) 687 WP_000661526.1 ribonuclease III -
  BJR96_RS04185 (SA111_00830) smc 768551..772090 (+) 3540 WP_047212078.1 chromosome segregation protein SMC -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 30273.24 Da        Isoelectric Point: 6.2265

>NTDB_id=1143695 BJR96_RS04170 WP_001289498.1 766501..767310(+) (vicX) [Streptococcus agalactiae isolate SA111]
MSEIGFKYSILASGSTGNCFYIETPQKRLLIDAGLTGKKVTSLLAEINRKPEDLDAILVTHEHSDHIKGVGVLARKYHLD
IYANEQTWKVMDERNMLGKVDVSQKHVFGRGKTLTFGDLDIESFGVSHDAVDPQFYRMMKDDKSFVMLTDTGYVSDRMAS
LIENADGYLIESNHDIEILRSGSYPWTLKQRILSDKGHLSNEDGSETMIRTIGNRTKHIYLGHLSKENNIKELAHMTMEN
NLMRADFGVGTDFSVHDTSPDSATPLTRI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=1143695 BJR96_RS04170 WP_001289498.1 766501..767310(+) (vicX) [Streptococcus agalactiae isolate SA111]
ATGTCAGAAATAGGATTTAAATATAGTATCTTAGCTTCAGGTTCAACTGGAAATTGTTTTTATATTGAGACACCCCAAAA
ACGTCTTTTAATTGACGCTGGTTTAACAGGCAAGAAAGTGACTAGCCTTCTTGCAGAAATTAATCGTAAACCAGAAGATT
TAGATGCTATACTAGTTACCCACGAACATTCTGACCACATTAAAGGTGTTGGCGTATTGGCTAGGAAATATCACCTTGAT
ATTTATGCCAATGAGCAGACGTGGAAAGTTATGGATGAGCGTAACATGTTAGGCAAAGTTGATGTTAGTCAAAAGCATGT
TTTTGGACGCGGTAAAACCTTAACTTTCGGGGATTTAGATATTGAGAGCTTTGGTGTAAGTCATGATGCTGTGGATCCCC
AATTTTACCGTATGATGAAAGATGATAAGAGCTTTGTGATGTTGACAGATACAGGATATGTTAGCGACCGAATGGCAAGC
TTGATTGAGAATGCAGATGGTTATTTGATCGAGTCAAATCACGACATTGAGATTCTACGTTCGGGTTCTTATCCCTGGAC
ACTTAAGCAACGTATTTTATCAGATAAAGGACATTTATCTAATGAAGATGGTTCAGAAACCATGATTCGCACTATAGGTA
ACCGTACTAAACACATCTATTTAGGACACTTGAGTAAGGAAAATAATATTAAGGAACTTGCTCACATGACTATGGAAAAC
AATTTAATGAGAGCTGACTTTGGTGTGGGCACAGATTTTTCTGTTCACGATACTTCACCTGATTCAGCTACCCCACTGAC
GAGGATTTAA

Domains

Predicted by InterproScan.

Beta-lactamase superfamily domain (Lactamase_B_2)

(28-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB X5KFV3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

76.58

100

0.766

Multiple sequence alignment