Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   BJR96_RS02280 Genome accession   NZ_LT545678
Coordinates   402942..403667 (+) Length   241 a.a.
NCBI ID   WP_000912310.1    Uniprot ID   A0AB74H7X3
Organism   Streptococcus agalactiae isolate SA111     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 397942..408667
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BJR96_RS02250 (SA111_00425) tsaE 398746..399189 (+) 444 WP_000500159.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  BJR96_RS02255 (SA111_00426) - 399182..399703 (+) 522 WP_000043143.1 GNAT family N-acetyltransferase -
  BJR96_RS02260 (SA111_00427) brpA 399712..401019 (+) 1308 WP_000708163.1 biofilm formation/cell division transcriptional regulator BrpA -
  BJR96_RS02265 (SA111_00428) - 401083..401379 (-) 297 WP_000690175.1 hypothetical protein -
  BJR96_RS02270 (SA111_00429) - 401376..401795 (-) 420 WP_000368097.1 HIT family protein -
  BJR96_RS02275 (SA111_00430) - 402131..402634 (+) 504 WP_000773455.1 hypothetical protein -
  BJR96_RS11405 - 402686..402870 (-) 185 Protein_372 hypothetical protein -
  BJR96_RS02280 (SA111_00431) pptA 402942..403667 (+) 726 WP_000912310.1 ABC transporter ATP-binding protein Regulator
  BJR96_RS02285 (SA111_00432) - 403669..404703 (+) 1035 WP_069986137.1 ABC transporter permease -
  BJR96_RS02290 (SA111_00433) ccrZ 404761..405561 (+) 801 WP_000155919.1 cell cycle regulator CcrZ -
  BJR96_RS02295 (SA111_00434) trmB 405551..406186 (+) 636 WP_001266022.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  BJR96_RS02305 (SA111_00436) rimP 406674..407150 (+) 477 WP_044133272.1 ribosome maturation factor RimP -
  BJR96_RS02310 (SA111_00437) nusA 407186..408337 (+) 1152 WP_000032295.1 transcription termination factor NusA -
  BJR96_RS02315 (SA111_00438) rnpM 408359..408655 (+) 297 WP_001140526.1 RNase P modulator RnpM -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26893.30 Da        Isoelectric Point: 4.5217

>NTDB_id=1143686 BJR96_RS02280 WP_000912310.1 402942..403667(+) (pptA) [Streptococcus agalactiae isolate SA111]
MLKIENVTGGYVNIPVLKNISFEVNDGELVGLIGLNGAGKSTTINEIIGILRPYQGDITIDGISLEADQELYRKKIGFIP
ETPSLYEELTLREHLETVAMAYDIATDEVMERAQKLLEMFRLTDKLDWFPMHFSKGMKQKVMIICAFVVSPSLFIVDEPF
LGLDPLAISDLINLLAEEKAKGKSILMSTHVLDSAEKMCDRFVILHKGEIRAVGTLEELRAIFGDSNANLNDIYIALTKE
V

Nucleotide


Download         Length: 726 bp        

>NTDB_id=1143686 BJR96_RS02280 WP_000912310.1 402942..403667(+) (pptA) [Streptococcus agalactiae isolate SA111]
ATGTTAAAAATTGAAAATGTTACAGGGGGGTATGTTAATATCCCAGTTTTAAAAAATATTTCTTTTGAAGTAAATGATGG
AGAATTAGTTGGATTAATTGGGCTTAATGGTGCAGGAAAATCAACCACTATTAACGAGATTATTGGTATTTTGAGACCCT
ATCAAGGAGATATTACAATTGATGGTATTAGTCTTGAAGCCGACCAAGAACTTTATAGAAAGAAAATAGGCTTTATTCCT
GAAACACCAAGTCTCTATGAGGAACTAACTCTCAGGGAACATTTAGAAACGGTAGCTATGGCGTATGATATTGCCACTGA
TGAAGTTATGGAACGTGCGCAAAAACTATTAGAGATGTTTCGTCTAACAGATAAATTAGACTGGTTTCCCATGCATTTTT
CAAAGGGAATGAAACAAAAGGTTATGATTATTTGTGCTTTTGTTGTATCTCCAAGTTTATTTATTGTTGATGAACCATTT
TTAGGTTTGGATCCACTAGCTATTTCAGATTTGATTAATCTTCTAGCAGAAGAAAAAGCTAAAGGGAAATCTATTTTGAT
GTCAACGCACGTATTAGATTCTGCCGAAAAAATGTGTGATCGTTTTGTTATTTTACATAAAGGAGAAATACGGGCAGTTG
GAACCCTAGAGGAATTACGGGCTATTTTTGGAGACAGTAATGCTAATTTAAATGACATCTACATAGCTCTGACAAAAGAG
GTGTGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus thermophilus LMD-9

77.406

99.17

0.768
  pptA Streptococcus salivarius strain HSISS4

77.406

99.17

0.768

Multiple sequence alignment