Detailed information    

insolico Bioinformatically predicted

Overview

Name   priA   Type   Machinery gene
Locus tag   AC2117_RS16910 Genome accession   NZ_LS999521
Coordinates   3526587..3528815 (+) Length   742 a.a.
NCBI ID   WP_133975626.1    Uniprot ID   A0A446ZNQ9
Organism   Acinetobacter calcoaceticus isolate Acinetobacter calcoaceticus str. 2117     
Function   DNA puliing through the inner membrane (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3521587..3533815
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AC2117_RS16885 (AC2117_03347) lnt 3521954..3523513 (+) 1560 WP_133975616.1 apolipoprotein N-acyltransferase -
  AC2117_RS16890 (AC2117_03348) - 3523515..3523853 (-) 339 WP_133975618.1 tRNA-binding protein -
  AC2117_RS16895 (AC2117_03349) - 3523999..3524343 (-) 345 WP_133975620.1 hypothetical protein -
  AC2117_RS16900 (AC2117_03350) gspG 3524613..3525209 (-) 597 WP_171459100.1 type II secretion system major pseudopilin GspG -
  AC2117_RS16905 (AC2117_03351) gspF 3525233..3526438 (-) 1206 WP_133975624.1 type II secretion system inner membrane protein GspF -
  AC2117_RS16910 (AC2117_03352) priA 3526587..3528815 (+) 2229 WP_133975626.1 primosomal protein N' Machinery gene
  AC2117_RS16915 (AC2117_03353) - 3528892..3530736 (+) 1845 WP_133975628.1 monovalent cation:proton antiporter-2 (CPA2) family protein -
  AC2117_RS16920 (AC2117_03354) - 3530903..3531778 (+) 876 WP_042894567.1 Hsp33 family molecular chaperone HslO -
  AC2117_RS16925 (AC2117_03355) - 3531916..3532527 (+) 612 WP_133975630.1 LysE family translocator -
  AC2117_RS16930 (AC2117_03356) - 3532697..3533653 (+) 957 WP_133976420.1 DnaJ C-terminal domain-containing protein -

Sequence

Protein


Download         Length: 742 a.a.        Molecular weight: 84104.09 Da        Isoelectric Point: 8.7593

>NTDB_id=1143505 AC2117_RS16910 WP_133975626.1 3526587..3528815(+) (priA) [Acinetobacter calcoaceticus isolate Acinetobacter calcoaceticus str. 2117]
MTITPKPNSVVYRVRVAVPVHLYDTFDYTLTEAQYERAQVGSRVAISFGRQNLIGIITEKVNPHEPFTGKFQLKAISELL
DEQPILDEQVLSLLTWSAQYYQFPVGEVMQTALPAILRQGKPMDVLFHLWKITPCDNVEALLKRSVKQQDAYQILKLHPA
GTTENILNLSGVETATLKALEKKGLVECTLEPHDFSPTPVQLAQMPLTLNEDQKQATQQVIKAQHQYQAFLLDGLTGSGK
TEVYLHIMHEVLKQGKQVLVLVPEIGLTPQTISRFKSRFNCDIALLHSGLNDSKRLQAWQQAQTGKASIILGTRSAIYTP
LPRLGLIILDEEHDLSYKQQEGFRYHARDVALYRGHLQSCPVILGSATPSIDSYYLVETGKLTSLQLNKRAGHALLPKMH
LIDLKIVKKQHGISQPLIEQIKNTLAKKEQVLIFLNRRGYAPVLVCESCGWQANCPHCDAHFTLHTQPYSYLHCHHCGTI
HRLPDHCPECQHKSLKTLGAGTAKVEEHLQELFPEHDVIRVDRDSTSRVGSWQKIYDRIHQNKPTILLGTQMLAKGHHFP
HVTLVAILDIDAGLLSVDIRAPERTAQLIVQVAGRAGRGEHKGHVYLQTLRPDHPLLTTLIEKDYRAVAKQTLAERKIAL
LPPYRYAVLIRAESKDRDYTLHFLNEAAEQLRQVAGEIIDIWGPIPAPMERKAGRYRAHMVILSADRARLHFYLRQWWAQ
LVHAPRQHQLRLSIDVDPQEFN

Nucleotide


Download         Length: 2229 bp        

>NTDB_id=1143505 AC2117_RS16910 WP_133975626.1 3526587..3528815(+) (priA) [Acinetobacter calcoaceticus isolate Acinetobacter calcoaceticus str. 2117]
ATGACCATAACGCCAAAGCCTAATTCAGTTGTTTATCGTGTGCGTGTTGCCGTACCTGTGCATCTGTACGACACTTTTGA
CTATACACTCACCGAAGCACAATATGAACGGGCTCAAGTAGGCTCACGCGTCGCTATTTCATTTGGGCGACAGAACCTGA
TTGGTATCATCACTGAAAAAGTGAATCCACATGAGCCATTTACAGGCAAATTTCAGCTTAAAGCCATTTCTGAACTTTTA
GATGAACAACCTATTTTAGATGAACAAGTTTTAAGTTTATTGACATGGTCCGCACAATATTACCAATTTCCAGTTGGCGA
GGTCATGCAAACCGCCCTTCCGGCTATACTGCGTCAGGGCAAACCGATGGACGTTTTGTTCCATCTCTGGAAAATTACTC
CATGCGACAATGTTGAGGCACTGCTTAAACGTTCAGTAAAGCAACAAGATGCTTATCAGATTTTAAAGTTACATCCTGCT
GGAACAACAGAGAATATTTTGAATTTAAGTGGTGTAGAAACTGCAACACTTAAAGCGCTAGAAAAGAAAGGGTTGGTTGA
GTGTACGCTTGAACCTCATGATTTTAGTCCAACACCCGTGCAATTGGCACAAATGCCGCTCACGCTAAATGAAGACCAAA
AGCAAGCAACCCAACAGGTTATTAAAGCACAGCACCAATACCAAGCATTTTTGCTAGATGGTTTAACGGGTAGTGGTAAA
ACAGAAGTTTATTTGCACATCATGCACGAGGTGCTAAAGCAAGGTAAACAAGTACTGGTGTTAGTTCCAGAAATTGGTTT
AACCCCCCAAACCATTTCCCGTTTTAAGTCTCGTTTTAATTGTGATATTGCACTGTTACATTCAGGCTTAAACGACTCTA
AACGCTTGCAAGCATGGCAACAGGCACAGACTGGCAAAGCATCTATTATTTTAGGGACACGCTCTGCCATCTATACACCG
CTGCCACGTTTGGGCTTAATCATTTTAGATGAAGAGCATGACCTGTCTTATAAGCAGCAAGAAGGCTTCCGTTACCATGC
GCGTGATGTCGCGCTTTATCGCGGTCACCTACAAAGCTGTCCTGTTATTTTAGGTTCAGCAACACCGAGTATTGATAGTT
ATTATTTAGTCGAAACTGGCAAATTAACTTCACTGCAACTTAACAAGCGTGCAGGCCATGCACTTTTGCCTAAAATGCAT
TTAATTGACCTTAAAATTGTAAAAAAACAGCATGGTATAAGTCAGCCGTTAATTGAACAAATTAAAAATACATTAGCTAA
AAAAGAACAGGTTTTAATCTTTTTAAACCGTCGTGGCTATGCACCTGTGCTGGTCTGCGAAAGCTGTGGATGGCAAGCAA
ATTGTCCACATTGTGATGCACATTTTACTCTGCACACCCAACCTTATTCTTATTTACATTGTCATCACTGCGGAACCATT
CATCGTTTACCAGATCATTGCCCTGAATGTCAGCATAAGAGTTTAAAAACTTTAGGTGCAGGAACAGCCAAGGTCGAAGA
ACACTTACAAGAATTATTTCCAGAGCATGACGTGATTCGGGTTGACCGCGACAGTACCAGCCGAGTCGGGAGCTGGCAAA
AAATCTATGATCGTATTCATCAAAACAAACCAACAATTTTGCTCGGCACGCAAATGTTGGCAAAAGGACATCATTTTCCC
CACGTGACCTTGGTTGCCATTTTAGATATTGATGCGGGTTTACTCAGTGTCGATATACGTGCCCCAGAACGTACTGCACA
ATTGATTGTTCAAGTAGCAGGCCGTGCTGGTCGTGGTGAGCATAAAGGTCATGTTTATTTGCAAACACTAAGACCAGATC
ATCCATTACTTACTACACTCATCGAAAAAGATTATCGCGCGGTTGCCAAACAGACTCTTGCGGAACGTAAAATTGCTTTA
CTGCCACCTTATCGCTATGCCGTACTGATACGTGCGGAGTCCAAAGATCGGGACTATACCTTGCATTTTTTAAATGAAGC
TGCCGAGCAACTTCGCCAAGTCGCTGGTGAGATTATTGATATTTGGGGACCTATTCCAGCACCAATGGAACGTAAAGCGG
GACGCTATCGTGCACATATGGTGATTTTATCTGCTGACCGTGCTCGTCTACATTTTTACTTAAGACAGTGGTGGGCACAA
TTGGTTCATGCGCCAAGACAACATCAACTCAGACTATCAATTGATGTCGATCCGCAAGAATTTAATTAG

Domains

Predicted by InterproScan.

Primosomal protein N C-terminal domain (PriA_C)

(643-738)

Type III restriction enzyme, res subunit (ResIII)

(208-370)

3DNA-binding domain (3BD) (PriA_3primeBD)

(15-114)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A446ZNQ9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  priA Acinetobacter baumannii D1279779

95.418

100

0.954

Multiple sequence alignment