Detailed information
Bioinformatically predicted
Overview
| Name | luxP | Type | Regulator |
| Locus tag | D5R51_RS18155 | Genome accession | NZ_LS997868 |
| Coordinates | 845878..846972 (-) | Length | 364 a.a. |
| NCBI ID | WP_119092072.1 | Uniprot ID | - |
| Organism | Vibrio paracholerae strain NCTC 30 | ||
| Function | autoinducer sensor (predicted from homology) Competence regulation |
||
Genomic Context
Location: 840878..851972
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D5R51_RS18130 (SAMEA104470976_03479) | - | 841236..841634 (+) | 399 | WP_000831415.1 | YgiW/YdeI family stress tolerance OB fold protein | - |
| D5R51_RS18140 (SAMEA104470976_03480) | - | 841870..842388 (+) | 519 | WP_162892147.1 | hypothetical protein | - |
| D5R51_RS18145 (SAMEA104470976_03481) | - | 842633..843298 (+) | 666 | WP_119092070.1 | flagellar brake protein | - |
| D5R51_RS18150 (SAMEA104470976_03482) | luxQ | 843290..845860 (-) | 2571 | WP_119092071.1 | quorum-sensing autoinducer 2 sensor kinase/phosphatase LuxQ | Regulator |
| D5R51_RS18155 (SAMEA104470976_03483) | luxP | 845878..846972 (-) | 1095 | WP_119092072.1 | autoinducer 2-binding periplasmic protein LuxP | Regulator |
| D5R51_RS18160 (SAMEA104470976_03484) | traF | 847184..848344 (-) | 1161 | WP_119092073.1 | conjugal transfer protein TraF | - |
| D5R51_RS18165 (SAMEA104470976_03485) | - | 848446..848751 (-) | 306 | WP_119092074.1 | GIY-YIG nuclease family protein | - |
| D5R51_RS18170 (SAMEA104470976_03486) | - | 848768..849415 (-) | 648 | WP_119092075.1 | YceH family protein | - |
| D5R51_RS18175 (SAMEA104470976_03487) | - | 849457..849654 (-) | 198 | WP_001246072.1 | hypothetical protein | - |
| D5R51_RS18180 (SAMEA104470976_03488) | - | 849843..850163 (+) | 321 | WP_001089529.1 | DUF496 family protein | - |
| D5R51_RS18190 (SAMEA104470976_03489) | - | 850575..850826 (+) | 252 | WP_001885413.1 | YgjV family protein | - |
Sequence
Protein
Download Length: 364 a.a. Molecular weight: 41334.12 Da Isoelectric Point: 6.7046
>NTDB_id=1143366 D5R51_RS18155 WP_119092072.1 845878..846972(-) (luxP) [Vibrio paracholerae strain NCTC 30]
MKRKLIFPLFLMAALFSSTGQADSLKGYWHYDEFLAEFPEQRPISELFAQTVRDKPSALTVAQKQPIIISVVYPGQQISD
YWVRNIKAFEKRMDALGIRYQINQVFTRPNLDTRQQSVSLMEALKNKSDYLIFTLDTTRHRKFIEHVLHSSETKLILQNI
TTPVKDWQGKQPMMYIGFDHEFGAQLLAQYYQAHAPKKPYSVLYFSEGYISEARGDTFIQDMNAVHHFPLASSYYTKATE
QSGYEATLNIVKNNPEIGFIYACATDVALGAAQALKELNRQDIMVNGWGGGSAELEALAKGELDVTVMRMNDDTGVAMAE
AIKWDLEGKTVPLVYSGDFEIVTKQDSAARVTELKARAFRYSDR
MKRKLIFPLFLMAALFSSTGQADSLKGYWHYDEFLAEFPEQRPISELFAQTVRDKPSALTVAQKQPIIISVVYPGQQISD
YWVRNIKAFEKRMDALGIRYQINQVFTRPNLDTRQQSVSLMEALKNKSDYLIFTLDTTRHRKFIEHVLHSSETKLILQNI
TTPVKDWQGKQPMMYIGFDHEFGAQLLAQYYQAHAPKKPYSVLYFSEGYISEARGDTFIQDMNAVHHFPLASSYYTKATE
QSGYEATLNIVKNNPEIGFIYACATDVALGAAQALKELNRQDIMVNGWGGGSAELEALAKGELDVTVMRMNDDTGVAMAE
AIKWDLEGKTVPLVYSGDFEIVTKQDSAARVTELKARAFRYSDR
Nucleotide
Download Length: 1095 bp
>NTDB_id=1143366 D5R51_RS18155 WP_119092072.1 845878..846972(-) (luxP) [Vibrio paracholerae strain NCTC 30]
ATGAAAAGAAAGCTAATATTCCCGCTGTTTCTGATGGCAGCGCTCTTCAGCTCAACTGGTCAAGCCGATTCATTAAAAGG
CTATTGGCATTATGATGAATTTCTTGCTGAGTTCCCTGAACAGCGGCCAATTTCCGAGCTTTTTGCTCAAACAGTTCGTG
ATAAACCGAGCGCGTTGACGGTGGCGCAAAAGCAACCCATCATTATTTCGGTGGTCTACCCCGGACAGCAAATTTCCGAC
TATTGGGTTCGCAACATCAAAGCGTTTGAAAAGCGAATGGACGCTTTAGGGATTCGCTATCAAATCAACCAGGTGTTTAC
TCGCCCGAATCTTGATACTCGCCAGCAGAGTGTTTCTTTGATGGAAGCGCTCAAAAATAAGAGTGACTATCTGATCTTTA
CCTTAGATACCACCCGTCACCGCAAATTCATTGAACATGTGCTGCACTCTTCTGAAACCAAGTTGATTTTGCAAAATATC
ACGACACCAGTGAAAGATTGGCAAGGTAAGCAGCCTATGATGTACATCGGCTTTGATCATGAGTTCGGCGCACAATTACT
GGCGCAATATTACCAAGCACATGCCCCTAAAAAGCCTTATTCAGTACTCTATTTTTCCGAGGGGTATATCAGTGAAGCAC
GAGGGGATACCTTCATCCAAGATATGAATGCGGTACACCATTTTCCGTTGGCTTCTTCCTATTACACTAAGGCAACCGAA
CAAAGTGGCTATGAAGCGACCCTAAACATCGTCAAGAATAATCCAGAAATTGGCTTTATTTACGCCTGTGCGACGGACGT
GGCTTTGGGAGCTGCGCAGGCACTGAAAGAGCTGAACCGACAAGATATTATGGTCAATGGTTGGGGCGGAGGCTCGGCTG
AATTGGAAGCGCTTGCTAAAGGCGAGTTGGATGTCACTGTAATGCGCATGAATGACGATACCGGCGTTGCCATGGCTGAA
GCGATAAAATGGGATTTGGAAGGAAAAACCGTACCTTTGGTGTATTCGGGCGATTTTGAAATTGTCACCAAGCAAGATTC
CGCTGCACGTGTTACAGAACTGAAAGCCCGGGCTTTCCGTTATTCAGATCGTTAG
ATGAAAAGAAAGCTAATATTCCCGCTGTTTCTGATGGCAGCGCTCTTCAGCTCAACTGGTCAAGCCGATTCATTAAAAGG
CTATTGGCATTATGATGAATTTCTTGCTGAGTTCCCTGAACAGCGGCCAATTTCCGAGCTTTTTGCTCAAACAGTTCGTG
ATAAACCGAGCGCGTTGACGGTGGCGCAAAAGCAACCCATCATTATTTCGGTGGTCTACCCCGGACAGCAAATTTCCGAC
TATTGGGTTCGCAACATCAAAGCGTTTGAAAAGCGAATGGACGCTTTAGGGATTCGCTATCAAATCAACCAGGTGTTTAC
TCGCCCGAATCTTGATACTCGCCAGCAGAGTGTTTCTTTGATGGAAGCGCTCAAAAATAAGAGTGACTATCTGATCTTTA
CCTTAGATACCACCCGTCACCGCAAATTCATTGAACATGTGCTGCACTCTTCTGAAACCAAGTTGATTTTGCAAAATATC
ACGACACCAGTGAAAGATTGGCAAGGTAAGCAGCCTATGATGTACATCGGCTTTGATCATGAGTTCGGCGCACAATTACT
GGCGCAATATTACCAAGCACATGCCCCTAAAAAGCCTTATTCAGTACTCTATTTTTCCGAGGGGTATATCAGTGAAGCAC
GAGGGGATACCTTCATCCAAGATATGAATGCGGTACACCATTTTCCGTTGGCTTCTTCCTATTACACTAAGGCAACCGAA
CAAAGTGGCTATGAAGCGACCCTAAACATCGTCAAGAATAATCCAGAAATTGGCTTTATTTACGCCTGTGCGACGGACGT
GGCTTTGGGAGCTGCGCAGGCACTGAAAGAGCTGAACCGACAAGATATTATGGTCAATGGTTGGGGCGGAGGCTCGGCTG
AATTGGAAGCGCTTGCTAAAGGCGAGTTGGATGTCACTGTAATGCGCATGAATGACGATACCGGCGTTGCCATGGCTGAA
GCGATAAAATGGGATTTGGAAGGAAAAACCGTACCTTTGGTGTATTCGGGCGATTTTGAAATTGTCACCAAGCAAGATTC
CGCTGCACGTGTTACAGAACTGAAAGCCCGGGCTTTCCGTTATTCAGATCGTTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| luxP | Vibrio cholerae strain A1552 |
97.253 |
100 |
0.973 |