Detailed information NTG1143326

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: D5R51_RS00775
• Genome accession: NZ_LS997867
• Coordinates: 166560..167567 (+)
• Length: 335 a.a.
• NCBI ID: WP_029627696.1
• Uniprot ID: A0AAX1QU39
• Organism: Vibrio paracholerae strain NCTC 30
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 161560..172567

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
D5R51_RS00755 (SAMEA104470976_00154)	metJ	161564..161881 (+)	318	WP_000796267.1	met regulon transcriptional regulator MetJ	-
D5R51_RS00760 (SAMEA104470976_00155)	-	161992..163269 (-)	1278	WP_001278588.1	malic enzyme-like NAD(P)-binding protein	-
D5R51_RS00765 (SAMEA104470976_00156)	rpmE	163577..163795 (-)	219	WP_000643446.1	50S ribosomal protein L31	-
D5R51_RS00770 (SAMEA104470976_00157)	priA	164050..166254 (+)	2205	WP_119090735.1	primosomal protein N'	-
D5R51_RS00775 (SAMEA104470976_00158)	cytR	166560..167567 (+)	1008	WP_029627696.1	DNA-binding transcriptional regulator CytR	Regulator
D5R51_RS00780 (SAMEA104470976_00159)	-	167739..168290 (+)	552	WP_057642156.1	SPOR domain-containing protein	-
D5R51_RS00785 (SAMEA104470976_00160)	hslV	168427..168984 (+)	558	WP_001960141.1	ATP-dependent protease subunit HslV	-
D5R51_RS00790 (SAMEA104470976_00161)	hslU	169050..170381 (+)	1332	WP_057642155.1	HslU--HslV peptidase ATPase subunit	-
D5R51_RS00795 (SAMEA104470976_00162)	-	170485..171402 (+)	918	WP_001066162.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
D5R51_RS00800 (SAMEA104470976_00163)	rraA	171477..171992 (+)	516	WP_029627692.1	ribonuclease E activity regulator RraA	-

Sequence

Protein

• Length: 335 a.a.
• Molecular weight: 37032.62 Da
• Isoelectric Point: 7.0759

>NTDB_id=1143326 D5R51_RS00775 WP_029627696.1 166560..167567(+) (cytR) [Vibrio paracholerae strain NCTC 30]
MATMKDVAQLAGVSTATVSRALMNPEKVSSSTRKRVEEAVLEAGYSPNSLARNLRRNESKTIVAIVPDICDPYFSEIIRG
IEDAAMEHGYLVLLGDSGQQKRRENSFVNLVFTKQADGMLLLGTDLPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDN
LTSAFEAVNYLTQLGHKRIAQISGPQHAALCQFRHQGYQQALRRAGITMNPTYCTFGDFTFEAGAKAVRQLLALPEQPTA
IFCHNDTMAIGAIQEAKRLGLRVPQDLSVVGFDDIQFAQYCDPPLTTISQPRYEIGRQAMLMMLELLRGHDVRAGSRLLE
TKLVLRESAAPPSKK

Nucleotide

• Length: 1008 bp

>NTDB_id=1143326 D5R51_RS00775 WP_029627696.1 166560..167567(+) (cytR) [Vibrio paracholerae strain NCTC 30]
ATGGCGACAATGAAGGATGTTGCCCAGCTTGCTGGAGTTTCAACTGCGACCGTGTCTCGTGCGTTGATGAATCCAGAGAA
AGTCTCGTCATCGACTCGTAAACGAGTCGAGGAGGCCGTGCTGGAAGCGGGTTACTCACCAAATTCTTTAGCGCGCAATT
TGCGGCGTAATGAATCCAAAACCATCGTTGCTATCGTGCCAGATATCTGTGATCCCTACTTTTCTGAGATCATTCGCGGC
ATTGAAGATGCCGCGATGGAGCACGGTTATCTGGTGCTGTTGGGGGATAGTGGTCAACAGAAGCGTCGGGAGAACTCGTT
CGTTAATCTGGTGTTTACCAAACAGGCAGACGGTATGTTGCTGTTGGGCACGGATTTGCCGTTTGATGTGAGTAAACCTG
AGCAGAAAAACCTACCGCCTATGGTGATGGCGTGTGAATTTGCGCCAGAGCTGGAACTGCCAACGGTACACATCGATAAC
CTGACCTCGGCATTTGAGGCGGTAAATTATCTCACTCAGCTTGGGCACAAACGGATTGCGCAGATCTCCGGTCCACAACA
TGCTGCGCTGTGCCAATTCCGTCATCAAGGCTATCAACAGGCGCTGCGTCGTGCTGGTATCACCATGAACCCGACTTACT
GCACTTTTGGCGATTTCACGTTTGAAGCCGGGGCAAAAGCGGTGCGTCAGCTGTTGGCATTGCCTGAGCAGCCGACCGCG
ATTTTCTGCCATAACGATACAATGGCGATTGGCGCGATTCAGGAAGCGAAGCGATTGGGTTTGCGTGTACCGCAAGATCT
CTCCGTGGTAGGTTTTGACGATATTCAATTCGCTCAGTATTGCGATCCTCCATTAACCACCATTTCGCAGCCGCGTTATG
AGATTGGCCGTCAAGCCATGCTGATGATGCTTGAGCTGCTTCGCGGACACGATGTGCGTGCTGGCTCGCGTCTCTTGGAG
ACCAAATTGGTATTGCGTGAGAGTGCTGCGCCGCCAAGCAAGAAGTAA

Domains

Predicted by InterproScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-328)

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio cholerae C6706	99.701	100	0.997
cytR	Vibrio parahaemolyticus RIMD 2210633	90.419	99.701	0.901