Detailed information NTG1142990

Bioinformatically predicted

Overview

• Name: HI0659
• Type: Machinery gene
• Locus tag: DQL00_RS11020
• Genome accession: NZ_LS483523
• Coordinates: 2074843..2075109 (-)
• Length: 88 a.a.
• NCBI ID: WP_001819358.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain 4041STDY6836169
• Function: DNA uptake (predicted from homology) DNA binding and uptake

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
IS/Tn	2075380..2075682	2074843..2075109	flank	271

Gene organization within MGE regions

Location: 2074843..2075682

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DQL00_RS11020	HI0659	2074843..2075109 (-)	267	WP_001819358.1	helix-turn-helix domain-containing protein	Machinery gene
DQL00_RS11025	-	2075235..2075682 (-)	448	Protein_2050	IS30 family transposase	-

Sequence

Protein

• Length: 88 a.a.
• Molecular weight: 9667.20 Da
• Isoelectric Point: 4.6537

>NTDB_id=1142990 DQL00_RS11020 WP_001819358.1 2074843..2075109(-) (HI0659) [Streptococcus pneumoniae strain 4041STDY6836169]
MEGCPSELFSKEEILESDMRVAIMSELIEARYEQGISQKKLEEVSGISQPVIARMETGKTSPQLDTVLKVLASLGKTLAV
VRLEQGKS

Nucleotide

• Length: 267 bp

>NTDB_id=1142990 DQL00_RS11020 WP_001819358.1 2074843..2075109(-) (HI0659) [Streptococcus pneumoniae strain 4041STDY6836169]
TTGGAAGGATGTCCATCTGAGCTCTTTAGCAAGGAGGAAATCCTTGAAAGTGATATGCGAGTGGCTATCATGAGCGAGTT
GATTGAGGCTAGGTATGAACAAGGAATCAGTCAGAAAAAGCTGGAAGAAGTCAGTGGAATAAGCCAGCCTGTCATAGCTA
GGATGGAGACAGGAAAGACTAGTCCTCAGTTGGATACAGTCTTAAAAGTCCTAGCCAGTTTAGGAAAGACACTAGCAGTC
GTCCGACTTGAACAGGGAAAAAGTTGA

Domains

Predicted by InterproScan.

• Helix-turn-helix (HTH_3) (29-79)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
HI0659	Haemophilus influenzae Rd KW20	58.442	87.5	0.511