Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   DQN68_RS02135 Genome accession   NZ_LS483522
Coordinates   403022..403747 (+) Length   241 a.a.
NCBI ID   WP_002983379.1    Uniprot ID   A0A4U7HHL6
Organism   Streptococcus pyogenes strain NCTC8224     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 398022..408747
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQN68_RS02105 (NCTC8224_00414) - 398201..399661 (+) 1461 WP_021733871.1 NCS2 family permease -
  DQN68_RS02110 (NCTC8224_00415) tsaE 399815..400276 (+) 462 WP_002983367.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  DQN68_RS02115 (NCTC8224_00416) - 400251..400775 (+) 525 WP_111712451.1 GNAT family N-acetyltransferase -
  DQN68_RS02120 (NCTC8224_00417) brpA 400784..402067 (+) 1284 WP_002994335.1 biofilm formation/cell division transcriptional regulator BrpA -
  DQN68_RS02125 (NCTC8224_00418) - 402178..402534 (-) 357 WP_021733872.1 hypothetical protein -
  DQN68_RS02130 (NCTC8224_00419) - 402531..402950 (-) 420 WP_002983376.1 HIT family protein -
  DQN68_RS02135 (NCTC8224_00420) pptA 403022..403747 (+) 726 WP_002983379.1 ABC transporter ATP-binding protein Regulator
  DQN68_RS02140 (NCTC8224_00421) - 403750..404784 (+) 1035 WP_002988663.1 ABC transporter permease -
  DQN68_RS02145 (NCTC8224_00422) ccrZ 404848..405639 (+) 792 WP_002983385.1 cell cycle regulator CcrZ -
  DQN68_RS02150 (NCTC8224_00423) trmB 405639..406274 (+) 636 WP_002983387.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  DQN68_RS02160 (NCTC8224_00425) rimP 406533..407069 (+) 537 WP_002988815.1 ribosome maturation factor RimP -
  DQN68_RS02165 (NCTC8224_00426) nusA 407244..408401 (+) 1158 WP_002994325.1 transcription termination factor NusA -
  DQN68_RS02170 (NCTC8224_00427) rnpM 408417..408713 (+) 297 WP_002983486.1 RNase P modulator RnpM -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26678.75 Da        Isoelectric Point: 4.5624

>NTDB_id=1142880 DQN68_RS02135 WP_002983379.1 403022..403747(+) (pptA) [Streptococcus pyogenes strain NCTC8224]
MLNIKNLTGGYHNIPVLNDVSFSVDNGELVGLIGLNGAGKSTTINEIIGFLKPYQGSISIDGLTLAENAVAYRQKIGFIP
ETPSLYEELTLSEHINTVAMAYDIDLEVAQKRAQPFLEMFRLTDKLEWFPVNFSKGMKQKVMIICAFVIDPSLFILDEPF
LGLDPLAISDLIQTLEVEKAKGKSILMSTHVLDSAERMCDRFVILHHGQVRAQGTLADLQEAFGDRSASLNDIYLALTKE
D

Nucleotide


Download         Length: 726 bp        

>NTDB_id=1142880 DQN68_RS02135 WP_002983379.1 403022..403747(+) (pptA) [Streptococcus pyogenes strain NCTC8224]
ATGTTAAACATTAAAAATCTAACAGGAGGATATCACAATATCCCTGTTTTAAACGATGTCTCATTTTCTGTAGACAATGG
AGAGTTAGTCGGTTTGATCGGGCTAAATGGTGCTGGAAAGTCAACAACTATCAACGAAATTATTGGCTTTTTGAAGCCTT
ATCAAGGAAGTATTTCTATTGATGGTTTAACTCTAGCAGAAAATGCAGTTGCCTACCGTCAAAAAATAGGTTTTATCCCA
GAAACTCCTAGTCTCTATGAAGAATTGACCTTATCAGAGCATATCAACACCGTAGCTATGGCTTATGATATCGACTTAGA
AGTGGCACAAAAACGAGCACAACCTTTCTTGGAAATGTTTCGTTTAACTGACAAACTTGAATGGTTTCCTGTCAATTTTT
CTAAAGGGATGAAACAAAAAGTCATGATTATTTGTGCCTTTGTCATTGATCCAAGTCTATTTATTCTTGATGAACCATTC
TTAGGGTTAGACCCTTTAGCTATTTCAGACTTAATCCAAACGCTAGAAGTCGAAAAAGCAAAAGGAAAATCTATTTTGAT
GAGTACACATGTTTTGGACTCTGCTGAAAGAATGTGTGATCGTTTTGTGATTTTGCATCATGGACAAGTTCGTGCCCAAG
GAACTCTTGCTGACTTGCAAGAAGCTTTTGGTGACCGTTCAGCGAGCTTAAATGATATCTATCTTGCATTAACAAAAGAG
GATTAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A4U7HHL6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

72.803

99.17

0.722
  pptA Streptococcus thermophilus LMD-9

71.967

99.17

0.714

Multiple sequence alignment