Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   DQL26_RS08430 Genome accession   NZ_LS483521
Coordinates   1703278..1703991 (+) Length   237 a.a.
NCBI ID   WP_111693458.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain NCTC8316     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1698278..1708991
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQL26_RS08420 (NCTC8316_01675) treC 1699351..1700979 (-) 1629 WP_111693456.1 alpha,alpha-phosphotrehalase -
  DQL26_RS08425 (NCTC8316_01676) treP 1701046..1703067 (-) 2022 WP_111693457.1 PTS system trehalose-specific EIIBC component -
  DQL26_RS08430 (NCTC8316_01677) treR 1703278..1703991 (+) 714 WP_111693458.1 trehalose operon repressor Regulator
  DQL26_RS08440 (NCTC8316_01678) - 1704270..1704608 (-) 339 Protein_1568 winged helix-turn-helix transcriptional regulator -
  DQL26_RS08445 (NCTC8316_01679) - 1704794..1705651 (+) 858 WP_111693459.1 VOC family protein -
  DQL26_RS08450 (NCTC8316_01680) yaaA 1705693..1706424 (+) 732 WP_023610692.1 peroxide stress protein YaaA -
  DQL26_RS08455 (NCTC8316_01681) nrdG 1706598..1707212 (-) 615 WP_021775544.1 anaerobic ribonucleoside-triphosphate reductase activating protein -
  DQL26_RS08460 (NCTC8316_01682) - 1707212..1707721 (-) 510 WP_011018311.1 GNAT family N-acetyltransferase -
  DQL26_RS08465 (NCTC8316_01683) - 1707730..1708665 (-) 936 WP_111693460.1 Gfo/Idh/MocA family protein -
  DQL26_RS08940 (NCTC8316_01684) - 1708694..1708840 (-) 147 WP_002982210.1 hypothetical protein -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27594.76 Da        Isoelectric Point: 9.6653

>NTDB_id=1142854 DQL26_RS08430 WP_111693458.1 1703278..1703991(+) (treR) [Streptococcus pyogenes strain NCTC8316]
MTKYERIYKDLETKINKDFYKEGDFLPTEIELSQQYQASRDTVRKALSLLTKAGLILKKQGRGTQVIRHHQIMFPISELT
SYQELVSYSNLDSKTNVIAIDKLIVDETLSKLTGFSKNSLVWRVTRQRVVEGVASVLDIDYLSKTLVPIMTREIAEHSIY
QYLEKELHLAIDFALKEVTIDQITDRDKILLDLGSDQHVVSVKSKVHLSNNNQFQFTESRHKLEKFKFLDFARRRPK

Nucleotide


Download         Length: 714 bp        

>NTDB_id=1142854 DQL26_RS08430 WP_111693458.1 1703278..1703991(+) (treR) [Streptococcus pyogenes strain NCTC8316]
ATGACAAAGTATGAACGTATTTATAAAGACCTCGAAACAAAAATAAACAAAGACTTTTACAAAGAAGGGGATTTTTTACC
TACTGAAATAGAATTGAGTCAACAATACCAAGCTAGCCGAGATACCGTCCGCAAGGCTCTCTCACTTCTCACAAAGGCAG
GTCTTATCCTCAAAAAACAAGGACGTGGCACCCAAGTGATTAGACATCATCAGATCATGTTCCCTATCTCAGAACTAACT
AGTTATCAGGAACTCGTCTCTTACTCAAATCTAGATTCTAAGACCAACGTCATTGCCATTGATAAACTGATTGTGGATGA
GACACTTTCAAAATTGACCGGTTTTAGCAAAAACAGCTTGGTCTGGCGTGTTACGCGCCAACGCGTTGTTGAGGGTGTGG
CTTCCGTCTTAGACATTGATTACCTTAGTAAAACTTTGGTGCCAATAATGACAAGGGAAATCGCAGAGCATTCTATTTAT
CAATATTTGGAAAAGGAACTCCATCTCGCCATTGACTTTGCCCTCAAAGAGGTTACCATTGACCAAATAACCGATCGTGA
TAAAATTTTACTTGACCTTGGATCAGACCAACATGTTGTTTCCGTCAAATCCAAAGTCCACCTTTCCAATAATAACCAAT
TCCAATTCACCGAGAGTCGCCATAAACTGGAAAAATTTAAATTTTTAGATTTTGCTCGGCGCAGACCAAAATAA

Domains

Predicted by InterproScan.

UTRA domain (UTRA)

(91-227)

Bacterial regulatory proteins, gntR family (GntR)

(3-66)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

67.949

98.734

0.671

Multiple sequence alignment