Detailed information NTG0114285

Bioinformatically predicted

Overview

• Name: comH
• Type: Machinery gene
• Locus tag: HPOKI898_RS07430
• Genome accession: NZ_CP006827
• Coordinates: 1548849..1550288 (-)
• Length: 479 a.a.
• NCBI ID: WP_025277203.1
• Uniprot ID: -
• Organism: Helicobacter pylori oki898
• Function: import of DNA into the periplasm (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1543849..1555288

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HPOKI898_RS07405 (HPOKI898_07725)	recG	1544974..1546845 (-)	1872	WP_025277201.1	ATP-dependent DNA helicase RecG	-
HPOKI898_RS07410 (HPOKI898_07730)	-	1546927..1547283 (+)	357	WP_025276469.1	hypothetical protein	-
HPOKI898_RS07415 (HPOKI898_07735)	-	1547287..1547922 (+)	636	WP_025277202.1	outer membrane protein	-
HPOKI898_RS07420 (HPOKI898_07740)	-	1547919..1548671 (-)	753	WP_015428408.1	exodeoxyribonuclease III	-
HPOKI898_RS07430 (HPOKI898_07750)	comH	1548849..1550288 (-)	1440	WP_025277203.1	hypothetical protein	Machinery gene
HPOKI898_RS07440 (HPOKI898_07755)	dnaA	1550517..1551884 (-)	1368	WP_015428410.1	chromosomal replication initiator protein DnaA	-
HPOKI898_RS07445 (HPOKI898_07760)	-	1552036..1552578 (+)	543	WP_025277204.1	purine-nucleoside phosphorylase	-
HPOKI898_RS07450 (HPOKI898_07765)	-	1552621..1552860 (+)	240	WP_000461832.1	DUF2443 domain-containing protein	-
HPOKI898_RS07455 (HPOKI898_07770)	glmS	1552861..1554654 (+)	1794	WP_015428412.1	glutamine--fructose-6-phosphate transaminase (isomerizing)	-

Sequence

Protein

• Length: 479 a.a.
• Molecular weight: 54838.69 Da
• Isoelectric Point: 6.6633

>NTDB_id=114285 HPOKI898_RS07430 WP_025277203.1 1548849..1550288(-) (comH) [Helicobacter pylori oki898]
MKKSLCLSFFLTFSNSLQALVIELLEEIKTSPHKGTFKAKVLDSKEPRQVLGVYNISPHKKLTLTITHISTAIVYQPLDE
KLSLETTLNPNRPTIPRNTQIVFSSKELKESHSHQMPSLNAPMQKPQNKPHSSQQPSQNFSYPESKLGSKNSKNSLLQPL
AIPSKISPTNETQTPTNDTKPPLKHSSEDQENNLFIAPPTEKTLPNNIPNTDISENNESNENKDNVEKQATRDPNIKEFA
CGKWVYDDENLQAYRPSILKRVDEDKQTATDITPCDYSTAENKSGKIITPYTKISVHKTEPLEEPQTFEAKNNFAILQSR
SSTEKCKRARARKDGTTRQCYLIEEPLKQAWESEYEITTQLVKAIYERPKQDDQVEPTFYETSELAYSSTRKSEITQNEL
NLNEKFMEFVEVYEGHYLNDIVKESSEYKEWVKNHVRFKEGVCMVLEIEEQPRAKSTPLSIENSRVVCVKKGNYLFNEV

Nucleotide

• Length: 1440 bp

>NTDB_id=114285 HPOKI898_RS07430 WP_025277203.1 1548849..1550288(-) (comH) [Helicobacter pylori oki898]
ATGAAAAAATCCCTTTGTCTGTCTTTCTTTCTGACTTTCTCTAACTCTCTTCAAGCCCTTGTGATCGAGCTTTTAGAAGA
GATCAAAACTTCGCCGCATAAAGGCACTTTTAAGGCTAAAGTCCTTGATTCTAAAGAACCAAGACAAGTTTTAGGCGTTT
ATAATATCTCCCCACACAAAAAACTCACGCTCACTATCACCCACATATCCACTGCAATTGTTTATCAACCCCTTGATGAA
AAACTTTCTTTAGAAACGACCTTAAACCCTAACCGCCCTACTATTCCCAGAAACACCCAAATTGTTTTTTCTTCAAAAGA
ATTGAAAGAGTCGCACTCGCACCAAATGCCTTCTTTAAACGCACCCATGCAAAAACCACAAAACAAGCCCCATTCATCGC
AACAACCTTCTCAAAACTTTTCTTACCCAGAGTCCAAACTAGGCTCTAAAAACTCTAAAAACAGCCTTTTGCAGCCTTTA
GCAATTCCTAGCAAAATAAGTCCCACTAACGAAACTCAAACGCCAACAAACGACACTAAACCCCCTTTAAAGCATTCTTC
AGAAGATCAAGAAAACAACCTCTTTATAGCGCCACCCACTGAAAAAACGCTCCCTAATAACATCCCTAACACTGATATTA
GTGAAAACAATGAAAGCAATGAAAATAAGGATAATGTGGAAAAACAAGCCACTAGAGATCCTAATATTAAAGAATTTGCG
TGCGGGAAGTGGGTCTATGACGATGAAAACTTGCAAGCCTATCGCCCAAGCATTTTAAAACGCGTTGATGAAGACAAACA
GACTGCGACAGATATTACCCCTTGCGATTACAGCACCGCTGAAAATAAAAGCGGTAAAATCATTACCCCCTATACTAAAA
TCTCCGTTCATAAAACAGAGCCTTTAGAAGAGCCACAAACTTTTGAAGCTAAAAACAATTTCGCCATTCTTCAATCCAGA
AGCTCTACAGAAAAATGCAAAAGGGCTAGAGCAAGAAAAGACGGCACAACTAGGCAATGCTATCTGATAGAAGAGCCTTT
AAAACAAGCATGGGAGAGTGAGTATGAAATCACCACGCAATTAGTGAAAGCCATTTATGAGCGCCCTAAACAAGACGACC
AAGTAGAGCCAACTTTTTATGAAACCAGCGAATTGGCTTATTCTTCCACACGAAAAAGCGAAATAACGCAAAATGAATTG
AATTTGAATGAAAAATTCATGGAATTTGTGGAAGTGTATGAGGGGCATTATTTAAACGATATAGTCAAAGAGAGCAGTGA
ATATAAAGAATGGGTTAAAAACCATGTGCGCTTTAAAGAAGGGGTGTGCATGGTTTTAGAAATAGAAGAACAACCACGAG
CTAAAAGCACGCCTTTGAGCATTGAAAACTCTCGTGTGGTGTGTGTCAAAAAGGGGAATTATTTATTCAACGAAGTTTGA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comH	Helicobacter pylori 26695	96.868	100	0.969