Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   DQL26_RS02370 Genome accession   NZ_LS483521
Coordinates   435468..436277 (+) Length   269 a.a.
NCBI ID   WP_002985641.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain NCTC8316     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 430468..441277
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQL26_RS02350 (NCTC8316_00462) - 430910..432157 (+) 1248 WP_111693060.1 AMP-binding protein -
  DQL26_RS02355 (NCTC8316_00463) - 432213..433247 (+) 1035 WP_161230152.1 DUF3114 domain-containing protein -
  DQL26_RS02360 (NCTC8316_00464) vicR 433409..434119 (+) 711 WP_002985645.1 response regulator YycF Regulator
  DQL26_RS02365 (NCTC8316_00465) vicK 434112..435464 (+) 1353 WP_111676637.1 cell wall metabolism sensor histidine kinase VicK Regulator
  DQL26_RS02370 (NCTC8316_00466) vicX 435468..436277 (+) 810 WP_002985641.1 MBL fold metallo-hydrolase Regulator
  DQL26_RS02375 (NCTC8316_00467) rnc 436720..437412 (+) 693 WP_002990670.1 ribonuclease III -
  DQL26_RS02380 (NCTC8316_00468) smc 437413..440952 (+) 3540 WP_111693061.1 chromosome segregation protein SMC -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 30095.20 Da        Isoelectric Point: 5.5314

>NTDB_id=1142832 DQL26_RS02370 WP_002985641.1 435468..436277(+) (vicX) [Streptococcus pyogenes strain NCTC8316]
MNESGFKYSILASGSTGNCFYLETPKKRLLIDAGLTGKKITSLLAEIDRKPEDLDAILITHEHSDHIKGVGVMARKYHLD
IYANEKTWQLMDECNMLGKLDASQKHIFQRDKVLTFGDVDIESFGVSHDAIDPQFYRIMKDNKSFVMLTDTGYVSDRMTG
IIENADGYLIESNHDIEILRSGSYPWSLKQRILSDLGHLSNEDGAGAMIRSLGYNTKKIYLGHLSKENNIKELAHMTMVN
QLAMADLAVGTDFTVHDTSPDTACPLTDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=1142832 DQL26_RS02370 WP_002985641.1 435468..436277(+) (vicX) [Streptococcus pyogenes strain NCTC8316]
ATGAATGAGAGTGGTTTTAAATATAGTATTTTAGCATCTGGGTCCACAGGAAATTGTTTTTATTTAGAAACACCTAAAAA
ACGCTTATTGATTGATGCAGGACTTACTGGTAAGAAAATTACCAGTCTTCTTGCTGAAATTGACCGCAAACCTGAGGATT
TGGATGCTATTTTGATTACCCATGAGCACTCTGACCATATTAAGGGTGTAGGCGTTATGGCCCGCAAATACCATTTGGAT
ATCTATGCTAATGAAAAAACATGGCAGCTGATGGATGAGTGCAATATGCTAGGTAAGCTTGATGCCTCACAAAAACATAT
TTTCCAAAGGGATAAAGTTTTGACCTTTGGAGATGTTGATATCGAAAGTTTTGGAGTCAGCCATGACGCTATTGATCCTC
AATTTTATCGGATTATGAAAGATAATAAGTCTTTTGTGATGTTGACAGATACAGGATATGTCAGTGATAGGATGACAGGT
ATTATTGAAAATGCAGATGGCTACTTGATTGAATCCAATCATGATATTGAAATTTTGAGATCAGGCTCTTATCCTTGGAG
CTTGAAGCAGCGTATTTTATCTGATTTAGGACATTTATCAAATGAAGATGGAGCGGGAGCCATGATTAGAAGCCTGGGGT
ACAATACCAAAAAAATATACCTAGGTCATCTGAGTAAAGAAAATAACATCAAAGAGTTAGCGCATATGACTATGGTCAAT
CAACTGGCTATGGCAGATTTAGCAGTAGGTACAGACTTTACGGTCCATGATACCTCTCCAGATACTGCTTGTCCATTAAC
TGATATTTGA

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-223)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

75.836

100

0.758

Multiple sequence alignment