Detailed information
Bioinformatically predicted
Overview
| Name | comYH | Type | Machinery gene |
| Locus tag | DQL26_RS00700 | Genome accession | NZ_LS483521 |
| Coordinates | 105770..106723 (+) | Length | 317 a.a. |
| NCBI ID | WP_002987790.1 | Uniprot ID | A0A5S4TCX5 |
| Organism | Streptococcus pyogenes strain NCTC8316 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 100770..111723
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DQL26_RS00660 (NCTC8316_00133) | - | 101582..101947 (+) | 366 | WP_002986560.1 | DUF1033 family protein | - |
| DQL26_RS00665 (NCTC8316_00134) | comYA | 102040..102993 (+) | 954 | WP_030126921.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| DQL26_RS00670 (NCTC8316_00135) | comYB | 102929..103963 (+) | 1035 | WP_011054115.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| DQL26_RS00675 (NCTC8316_00136) | comYC | 103965..104291 (+) | 327 | WP_002986552.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| DQL26_RS00680 (NCTC8316_00137) | comGD | 104266..104694 (+) | 429 | WP_109991901.1 | competence type IV pilus minor pilin ComGD | - |
| DQL26_RS00685 (NCTC8316_00138) | comGE | 104651..104935 (+) | 285 | WP_269460045.1 | competence type IV pilus minor pilin ComGE | - |
| DQL26_RS00690 (NCTC8316_00139) | comYF | 104928..105362 (+) | 435 | WP_002987783.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| DQL26_RS00695 (NCTC8316_00140) | comGG | 105346..105672 (+) | 327 | WP_009880358.1 | competence type IV pilus minor pilin ComGG | - |
| DQL26_RS00700 (NCTC8316_00141) | comYH | 105770..106723 (+) | 954 | WP_002987790.1 | class I SAM-dependent methyltransferase | Machinery gene |
| DQL26_RS00705 (NCTC8316_00142) | - | 106782..107978 (+) | 1197 | WP_002987791.1 | acetate kinase | - |
| DQL26_RS00710 | - | 108165..108473 (+) | 309 | WP_010921804.1 | hypothetical protein | - |
| DQL26_RS00715 (NCTC8316_00143) | proC | 108556..109326 (-) | 771 | WP_111692971.1 | pyrroline-5-carboxylate reductase | - |
| DQL26_RS00720 (NCTC8316_00144) | pepA | 109374..110441 (-) | 1068 | WP_011054119.1 | glutamyl aminopeptidase | - |
| DQL26_RS00730 (NCTC8316_00145) | - | 110906..111190 (+) | 285 | WP_002992749.1 | DUF4651 domain-containing protein | - |
| DQL26_RS00735 (NCTC8316_00146) | - | 111187..111504 (+) | 318 | WP_111688394.1 | thioredoxin family protein | - |
Sequence
Protein
Download Length: 317 a.a. Molecular weight: 35985.08 Da Isoelectric Point: 4.7205
>NTDB_id=1142815 DQL26_RS00700 WP_002987790.1 105770..106723(+) (comYH) [Streptococcus pyogenes strain NCTC8316]
MTFEKIEEAYQLLLENCQLIENDLKTHIYDAIVEQNSFYLGAEGASPQVAQNSDKLKALCLTKEEWRKAYQFLFIKAAQT
EQLQANHQFTPDAIGFILLYLLEQLSDKDSLEVLEIGSGTGNLAQTLLNNTSKSLDYVGIELDDLLIDLSASIAEIMDSS
AHFIQEDAVRPQLLKESDIVISDLPVGYYPNDDIAKRYKVASSDKHTYAHHLLMEQSLKYLKKDGFAIFLAPVNLLTSPQ
SQLLKQWLKDYAQVVALITLPDSIFGHPSNAKSIIVLQKQTDHPMETFVYPIRDLKLAENIHDFMENFKKWKLSNVN
MTFEKIEEAYQLLLENCQLIENDLKTHIYDAIVEQNSFYLGAEGASPQVAQNSDKLKALCLTKEEWRKAYQFLFIKAAQT
EQLQANHQFTPDAIGFILLYLLEQLSDKDSLEVLEIGSGTGNLAQTLLNNTSKSLDYVGIELDDLLIDLSASIAEIMDSS
AHFIQEDAVRPQLLKESDIVISDLPVGYYPNDDIAKRYKVASSDKHTYAHHLLMEQSLKYLKKDGFAIFLAPVNLLTSPQ
SQLLKQWLKDYAQVVALITLPDSIFGHPSNAKSIIVLQKQTDHPMETFVYPIRDLKLAENIHDFMENFKKWKLSNVN
Nucleotide
Download Length: 954 bp
>NTDB_id=1142815 DQL26_RS00700 WP_002987790.1 105770..106723(+) (comYH) [Streptococcus pyogenes strain NCTC8316]
ATGACTTTTGAAAAAATTGAAGAAGCTTATCAGCTGCTCTTAGAGAACTGTCAACTAATTGAAAATGATCTAAAAACACA
TATATACGATGCCATTGTTGAACAAAACTCCTTTTATTTAGGGGCTGAGGGAGCTAGTCCTCAAGTTGCTCAAAATAGTG
ATAAACTGAAAGCCTTGTGCCTGACAAAAGAAGAATGGCGTAAGGCCTACCAGTTTCTTTTTATTAAGGCAGCTCAGACT
GAGCAACTCCAAGCCAACCATCAGTTCACACCAGATGCTATTGGCTTCATTCTGCTGTATCTTTTGGAACAATTGAGTGA
TAAAGATAGCTTAGAGGTACTTGAGATTGGAAGTGGAACAGGGAACCTAGCCCAAACCCTTCTCAACAACACGAGCAAGA
GCCTTGATTATGTAGGGATTGAACTTGATGATCTCTTGATTGATCTGTCAGCCAGTATTGCTGAAATAATGGATTCTTCA
GCTCATTTTATTCAAGAAGATGCGGTAAGGCCTCAATTACTAAAAGAAAGTGACATTGTCATCAGTGACTTACCAGTTGG
TTATTATCCTAACGATGATATTGCCAAACGGTACAAGGTGGCTAGTTCAGATAAGCATACCTATGCCCATCATTTATTAA
TGGAACAGTCTTTAAAATACTTGAAAAAAGACGGTTTTGCGATTTTTCTGGCACCAGTCAATTTATTGACGAGCCCTCAG
AGCCAGTTATTGAAACAGTGGTTAAAAGATTATGCTCAGGTGGTGGCCTTGATTACGCTACCAGATTCTATTTTTGGTCA
TCCCTCAAATGCCAAGTCCATTATTGTCTTACAAAAACAAACAGACCACCCAATGGAAACCTTTGTCTATCCAATTCGGG
ATTTGAAGCTTGCAGAGAATATTCATGATTTTATGGAAAATTTCAAAAAATGGAAACTGAGTAATGTCAATTAA
ATGACTTTTGAAAAAATTGAAGAAGCTTATCAGCTGCTCTTAGAGAACTGTCAACTAATTGAAAATGATCTAAAAACACA
TATATACGATGCCATTGTTGAACAAAACTCCTTTTATTTAGGGGCTGAGGGAGCTAGTCCTCAAGTTGCTCAAAATAGTG
ATAAACTGAAAGCCTTGTGCCTGACAAAAGAAGAATGGCGTAAGGCCTACCAGTTTCTTTTTATTAAGGCAGCTCAGACT
GAGCAACTCCAAGCCAACCATCAGTTCACACCAGATGCTATTGGCTTCATTCTGCTGTATCTTTTGGAACAATTGAGTGA
TAAAGATAGCTTAGAGGTACTTGAGATTGGAAGTGGAACAGGGAACCTAGCCCAAACCCTTCTCAACAACACGAGCAAGA
GCCTTGATTATGTAGGGATTGAACTTGATGATCTCTTGATTGATCTGTCAGCCAGTATTGCTGAAATAATGGATTCTTCA
GCTCATTTTATTCAAGAAGATGCGGTAAGGCCTCAATTACTAAAAGAAAGTGACATTGTCATCAGTGACTTACCAGTTGG
TTATTATCCTAACGATGATATTGCCAAACGGTACAAGGTGGCTAGTTCAGATAAGCATACCTATGCCCATCATTTATTAA
TGGAACAGTCTTTAAAATACTTGAAAAAAGACGGTTTTGCGATTTTTCTGGCACCAGTCAATTTATTGACGAGCCCTCAG
AGCCAGTTATTGAAACAGTGGTTAAAAGATTATGCTCAGGTGGTGGCCTTGATTACGCTACCAGATTCTATTTTTGGTCA
TCCCTCAAATGCCAAGTCCATTATTGTCTTACAAAAACAAACAGACCACCCAATGGAAACCTTTGTCTATCCAATTCGGG
ATTTGAAGCTTGCAGAGAATATTCATGATTTTATGGAAAATTTCAAAAAATGGAAACTGAGTAATGTCAATTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comYH | Streptococcus mutans UA159 |
66.139 |
99.685 |
0.659 |
| comYH | Streptococcus mutans UA140 |
65.823 |
99.685 |
0.656 |