Detailed information    

insolico Bioinformatically predicted

Overview


Name   HI0659   Type   Machinery gene
Locus tag   DQL17_RS01645 Genome accession   NZ_LS483496
Coordinates   330626..330922 (+) Length   98 a.a.
NCBI ID   WP_005650837.1    Uniprot ID   Q4QMQ7
Organism   Haemophilus influenzae strain NCTC8455     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 325626..335922
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQL17_RS09490 - 326737..326832 (-) 96 Protein_316 ABC transporter -
  DQL17_RS01635 (NCTC8455_00321) - 327208..330181 (+) 2974 Protein_317 TonB-dependent hemoglobin/transferrin/lactoferrin family receptor -
  DQL17_RS01640 (NCTC8455_00322) - 330451..330633 (+) 183 WP_005654546.1 shikimate 5-dehydrogenase -
  DQL17_RS01645 (NCTC8455_00323) HI0659 330626..330922 (+) 297 WP_005650837.1 helix-turn-helix domain-containing protein Machinery gene
  DQL17_RS01650 (NCTC8455_00324) - 331079..332995 (+) 1917 WP_111688801.1 ABC transporter ATP-binding protein -
  DQL17_RS01655 (NCTC8455_00325) - 333005..333541 (+) 537 WP_042601037.1 topoisomerase DNA-binding C4 zinc finger domain-containing protein -
  DQL17_RS01660 (NCTC8455_00326) - 333557..334108 (+) 552 WP_111688802.1 Sua5/YciO/YrdC/YwlC family protein -
  DQL17_RS01665 (NCTC8455_00327) aroE 334112..334930 (+) 819 WP_111688803.1 shikimate dehydrogenase -
  DQL17_RS01670 (NCTC8455_00328) - 334927..335484 (+) 558 WP_050949054.1 DNA-3-methyladenine glycosylase I -

Sequence


Protein


Download         Length: 98 a.a.        Molecular weight: 11092.94 Da        Isoelectric Point: 10.3139

>NTDB_id=1142711 DQL17_RS01645 WP_005650837.1 330626..330922(+) (HI0659) [Haemophilus influenzae strain NCTC8455]
MNKISPLGSNWNEFEQQIFNEEEIRESNLRVALIKELITSRQQLGISQKQLETLSGVKQPMIARIEKGQTNPQLETLLKL
LAPLGKTLSIVPLRVKNA

Nucleotide


Download         Length: 297 bp        

>NTDB_id=1142711 DQL17_RS01645 WP_005650837.1 330626..330922(+) (HI0659) [Haemophilus influenzae strain NCTC8455]
ATGAATAAAATCAGCCCATTAGGTTCAAATTGGAATGAGTTTGAACAGCAAATTTTCAATGAAGAAGAAATCCGAGAAAG
TAATTTGCGTGTAGCCTTAATTAAAGAATTGATTACTTCTCGCCAGCAACTTGGGATTTCCCAAAAACAACTTGAAACCT
TAAGCGGTGTGAAGCAACCTATGATTGCACGCATTGAAAAAGGACAAACGAATCCTCAGCTTGAAACGTTGTTAAAATTG
CTCGCTCCTTTAGGGAAAACCCTGTCGATTGTTCCTCTAAGGGTAAAAAATGCCTAA

Domains


Predicted by InterproScan.

(41-89)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB Q4QMQ7

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  HI0659 Haemophilus influenzae Rd KW20

100

100

1


Multiple sequence alignment