Detailed information    

insolico Bioinformatically predicted

Overview

Name   braS   Type   Regulator
Locus tag   DQL57_RS10570 Genome accession   NZ_LS483491
Coordinates   2196877..2197770 (-) Length   297 a.a.
NCBI ID   WP_180991909.1    Uniprot ID   A0AAW7MDI6
Organism   Staphylococcus auricularis strain NCTC12101     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2191877..2202770
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQL57_RS10555 (NCTC12101_02222) - 2191948..2193906 (+) 1959 WP_059107062.1 flavodoxin domain-containing protein -
  DQL57_RS10560 (NCTC12101_02223) - 2194037..2196022 (-) 1986 WP_059107061.1 ABC transporter permease -
  DQL57_RS10565 (NCTC12101_02224) - 2196024..2196773 (-) 750 WP_059107060.1 ABC transporter ATP-binding protein -
  DQL57_RS10570 (NCTC12101_02225) braS 2196877..2197770 (-) 894 WP_180991909.1 sensor histidine kinase Regulator
  DQL57_RS10575 (NCTC12101_02226) braR 2197784..2198449 (-) 666 WP_059107058.1 response regulator transcription factor Regulator
  DQL57_RS10580 (NCTC12101_02227) xylB 2198766..2200271 (+) 1506 WP_059107057.1 xylulokinase -
  DQL57_RS10585 (NCTC12101_02229) - 2200556..2201137 (+) 582 WP_059107056.1 thiamine phosphate synthase -
  DQL57_RS10590 (NCTC12101_02230) thiO 2201137..2202258 (+) 1122 WP_059107104.1 glycine oxidase ThiO -
  DQL57_RS10595 (NCTC12101_02231) thiS 2202242..2202442 (+) 201 WP_059107055.1 sulfur carrier protein ThiS -

Sequence

Protein


Download         Length: 297 a.a.        Molecular weight: 34660.26 Da        Isoelectric Point: 6.3586

>NTDB_id=1142701 DQL57_RS10570 WP_180991909.1 2196877..2197770(-) (braS) [Staphylococcus auricularis strain NCTC12101]
MKFINEIKNEIIIAIGILILFLVIFFVFSLPMEAFFLGAAIVLFILIIYWVIQFMNFKEKLRLKTQVDQLEDQLETMRRE
QIEYKNEIEAYFLTWVHQIKTPITASKLLLEQNHEDTVNRVRQEILQIDNYTNLALSYLKLINQQTDMVLMKVSIDDLIR
TLIKKYSIQFIQNHTKVHYEKVTDEVLTDAKWASIMIEQILNNALKYARGKDIWIDFDSQQNQLKIADNGIGISQADKPK
IFDRGYSGYNGRLNDKSSGIGLFIVKQIANRLQHKVEVESELNEGATFTITFPQQTT

Nucleotide


Download         Length: 894 bp        

>NTDB_id=1142701 DQL57_RS10570 WP_180991909.1 2196877..2197770(-) (braS) [Staphylococcus auricularis strain NCTC12101]
ATGAAATTTATAAACGAGATTAAAAATGAAATCATCATCGCTATCGGAATTTTAATCCTATTTTTAGTGATCTTTTTCGT
GTTTTCGCTGCCAATGGAGGCTTTCTTTTTAGGGGCTGCTATCGTGCTCTTTATACTAATCATTTACTGGGTCATTCAGT
TCATGAATTTTAAAGAAAAATTGCGTTTGAAAACACAAGTGGATCAATTAGAAGATCAGTTAGAAACGATGCGACGCGAA
CAAATTGAGTATAAAAATGAAATAGAAGCTTACTTTTTAACGTGGGTACACCAAATTAAGACGCCGATTACCGCTTCTAA
ACTATTACTCGAACAAAATCATGAAGATACAGTCAATCGTGTGCGACAAGAAATCTTACAAATTGATAACTACACGAACC
TTGCACTCAGTTATTTAAAATTAATTAACCAACAGACCGATATGGTATTGATGAAAGTATCGATTGATGACCTAATTCGC
ACGCTCATTAAAAAATATTCAATCCAGTTCATTCAAAACCATACTAAAGTCCATTATGAAAAAGTGACAGATGAAGTGTT
AACTGATGCGAAATGGGCTTCGATCATGATCGAACAAATTCTCAACAATGCGTTGAAATATGCGAGAGGAAAAGATATAT
GGATTGATTTTGATTCACAACAAAACCAACTCAAGATTGCGGATAACGGTATTGGTATCAGCCAAGCAGATAAACCTAAA
ATATTTGATCGCGGATATTCCGGCTATAACGGTCGTTTAAATGATAAATCGAGTGGCATTGGGTTATTTATCGTGAAACA
AATTGCGAATCGTCTTCAACATAAAGTAGAAGTTGAGTCTGAGTTAAATGAAGGGGCGACGTTTACCATCACTTTCCCAC
AACAAACAACGTAA

Domains

Predicted by InterproScan.

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(194-295)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braS Staphylococcus aureus N315

57.288

99.327

0.569

Multiple sequence alignment