Detailed information NTG1142686

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: DQL57_RS05790
• Genome accession: NZ_LS483491
• Coordinates: 1248960..1251389 (-)
• Length: 809 a.a.
• NCBI ID: WP_059107228.1
• Uniprot ID: A0AAP8PMM7
• Organism: Staphylococcus auricularis strain NCTC12101
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1243960..1256389

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DQL57_RS05770 (NCTC12101_01211)	-	1244887..1245207 (-)	321	WP_059107232.1	DUF1292 domain-containing protein	-
DQL57_RS05775 (NCTC12101_01212)	ruvX	1245223..1245651 (-)	429	WP_059107231.1	Holliday junction resolvase RuvX	-
DQL57_RS05780 (NCTC12101_01213)	-	1245664..1245918 (-)	255	WP_059107230.1	IreB family regulatory phosphoprotein	-
DQL57_RS05785 (NCTC12101_01214)	alaS	1245998..1248628 (-)	2631	WP_059107229.1	alanine--tRNA ligase	-
DQL57_RS05790 (NCTC12101_01216)	recD2	1248960..1251389 (-)	2430	WP_059107228.1	ATP-dependent RecD-like DNA helicase	Machinery gene
DQL57_RS05795 (NCTC12101_01217)	-	1251391..1252059 (-)	669	WP_059107227.1	tetratricopeptide repeat protein	-
DQL57_RS05800 (NCTC12101_01218)	mnmA	1252192..1253304 (-)	1113	WP_059107226.1	tRNA 2-thiouridine(34) synthase MnmA	-
DQL57_RS05805 (NCTC12101_01219)	-	1253305..1254447 (-)	1143	WP_059107225.1	cysteine desulfurase family protein	-
DQL57_RS05810 (NCTC12101_01221)	-	1254759..1255760 (+)	1002	WP_059107224.1	LLM class flavin-dependent oxidoreductase	-
DQL57_RS05815 (NCTC12101_01222)	-	1255999..1256184 (-)	186	WP_059107223.1	CsbD family protein	-

Sequence

Protein

• Length: 809 a.a.
• Molecular weight: 91126.30 Da
• Isoelectric Point: 4.3927

>NTDB_id=1142686 DQL57_RS05790 WP_059107228.1 1248960..1251389(-) (recD2) [Staphylococcus auricularis strain NCTC12101]
MEEGPTLFEQTTVKGTVDAIVFQNKDNFYTVLKVEPSESDETFDSTPTVVGFFPDIVEGDVYTFKGQIVNHTKYGKQLKA
ETFEKELPQTKEAIISYLSSDLFKGVGKKTAQSIVNALGDNAINDILNDETLLSKVPGLSKKKQQQIAEQINANQETEKI
IIRLHDLGFGPKLAMNIYQTYMSDTLEIVEKKPYQLVYDVKGIGFNKADTLARNIGIAYDDPERIKAGLLYVLEEECVKQ
GHTYLPTSYVYEMTVDMLSQPPEETIETALVESMTQELIEETKLIEHEDQLAIPSLYYSELKSVQTLYRVFSYTHKMTEF
ELSDLQLHIGEIEERQEVSYAALQKEALQTAMNTKVMLLTGGPGTGKTTVIKGIVDLYAEVHGISLDYDDYSEDDYPVVL
AAPTGRAAKRLAEATGLEAMTIHRLIGWNQDTQPEDILDHEINARLIIIDEMSMVDTWLFHQFMSAVPLDAQIIFVGDED
QLPSVGPGQVFKDLIESKVIPRVNLTEVYRQQDGSSIIELAHHIKLGQPIDITKRYHDRNFIRCGAEQIPNVVEQIVSNA
VTKGYDMSDIQVLAPMYKGSAGIKKLNKVLQDILNPKAKDSREIEFGDVVFRKGDKVLQLVNRPNDNIFNGDIGVIVGVF
WAKENALNKDVLVVDFEGNEITFTRQDLIELTHAYCTSIHKSQGSEFPIVIMPMVKQYYRMLQKPILYTGLTRAKQSLVL
LGDPQAFDIGLNTEGKARMTQLCTFLKQYFGEDEDNNTEEHNSEVTDADSEEAETPTQEANFVLTETDMFSIDPMINMGK
VTPYDFNDD

Nucleotide

• Length: 2430 bp

>NTDB_id=1142686 DQL57_RS05790 WP_059107228.1 1248960..1251389(-) (recD2) [Staphylococcus auricularis strain NCTC12101]
ATGGAGGAAGGCCCTACATTGTTTGAACAGACGACAGTGAAAGGCACTGTTGACGCAATCGTATTCCAAAATAAAGATAA
TTTTTATACTGTGTTAAAAGTAGAGCCTAGTGAGTCAGATGAAACGTTTGATTCAACGCCAACGGTTGTAGGGTTCTTTC
CTGACATTGTAGAAGGTGATGTGTATACCTTCAAAGGCCAAATTGTTAATCACACCAAATATGGTAAGCAACTAAAAGCC
GAAACGTTTGAAAAAGAATTACCTCAAACAAAAGAAGCCATCATCAGTTATTTATCTAGCGATCTTTTTAAAGGTGTCGG
TAAAAAAACTGCTCAAAGTATTGTGAATGCCCTTGGAGATAATGCGATTAATGACATATTAAATGATGAAACATTACTGT
CTAAAGTGCCTGGGCTTTCGAAAAAGAAACAACAACAAATTGCTGAACAAATCAATGCAAACCAAGAAACAGAAAAAATT
ATTATCCGGTTACATGATTTAGGTTTCGGACCTAAACTGGCAATGAATATCTATCAAACATACATGAGTGATACGTTAGA
GATTGTAGAGAAAAAGCCCTACCAACTCGTTTATGATGTTAAGGGTATTGGTTTTAATAAAGCAGATACACTCGCACGTA
ATATTGGTATTGCTTATGACGATCCAGAACGCATTAAAGCGGGTTTACTTTATGTTCTCGAAGAAGAATGTGTGAAACAA
GGTCATACGTATCTCCCAACATCATATGTTTATGAGATGACAGTAGACATGTTGTCACAACCACCTGAAGAAACGATTGA
GACAGCGTTAGTTGAAAGCATGACGCAGGAATTGATTGAGGAAACTAAATTAATTGAACACGAAGATCAGCTCGCAATAC
CTAGCCTCTATTACTCCGAATTAAAGAGTGTCCAAACACTGTATAGAGTCTTTAGCTACACACATAAAATGACAGAATTT
GAATTATCAGATTTACAATTACATATCGGAGAAATTGAAGAACGACAAGAAGTCAGTTATGCCGCTTTACAAAAAGAAGC
ATTACAGACAGCGATGAATACGAAAGTCATGTTGCTCACAGGGGGCCCCGGAACTGGTAAAACAACAGTCATTAAAGGTA
TTGTTGATTTATATGCAGAAGTCCATGGTATTTCACTCGATTATGATGATTATAGCGAAGATGATTATCCAGTAGTGCTC
GCAGCGCCTACAGGTCGTGCAGCGAAACGGTTAGCTGAAGCGACAGGCTTAGAAGCGATGACGATTCACCGTTTAATTGG
ATGGAATCAGGATACCCAACCGGAAGACATTTTAGATCATGAAATTAATGCTCGGTTGATTATCATCGATGAGATGTCGA
TGGTAGATACATGGTTGTTCCATCAATTTATGAGTGCTGTGCCGTTAGATGCACAGATTATCTTTGTCGGTGATGAAGAC
CAGCTTCCATCTGTTGGACCAGGTCAAGTGTTCAAAGATTTAATTGAATCGAAAGTCATTCCTAGGGTGAACTTAACCGA
AGTTTATCGTCAACAAGATGGTTCAAGTATTATTGAACTCGCCCATCACATTAAATTGGGTCAACCGATTGATATTACGA
AACGGTATCACGATCGAAATTTCATCAGATGTGGTGCAGAACAAATTCCGAATGTTGTCGAGCAGATTGTATCGAATGCT
GTAACGAAAGGTTACGACATGAGTGATATTCAAGTCCTTGCACCGATGTATAAAGGCTCAGCAGGGATTAAAAAGCTCAA
TAAAGTACTGCAAGACATTTTAAACCCGAAAGCGAAAGACTCACGTGAAATTGAATTTGGTGATGTGGTCTTCCGTAAGG
GCGATAAAGTATTACAGCTTGTCAATCGACCTAACGATAATATCTTCAACGGAGATATTGGCGTTATTGTAGGAGTGTTT
TGGGCTAAAGAAAATGCGCTGAATAAAGATGTCTTAGTCGTTGATTTTGAAGGCAATGAAATTACCTTCACACGACAAGA
TTTAATTGAATTAACTCATGCTTATTGCACTTCGATCCATAAATCTCAAGGTTCGGAATTCCCAATCGTGATCATGCCAA
TGGTGAAACAATATTATCGCATGTTGCAAAAACCAATCCTTTATACAGGGTTAACAAGGGCGAAACAATCACTGGTGTTA
CTCGGAGATCCCCAAGCTTTTGACATTGGTCTTAATACTGAAGGTAAGGCACGGATGACACAGCTTTGTACATTCTTAAA
ACAATACTTCGGTGAAGATGAAGATAACAACACAGAAGAACACAATTCTGAAGTGACTGATGCAGATAGTGAGGAAGCAG
AAACACCAACACAAGAAGCTAATTTTGTATTGACGGAAACGGATATGTTCAGCATTGATCCAATGATTAATATGGGAAAA
GTTACGCCTTACGATTTCAATGATGATTGA

Domains

Predicted by InterproScan.

• Helix-hairpin-helix containing domain (HHH_RecD2) (154-244)

• Helix-hairpin-helix domain (HHH_5) (104-151)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (586-656)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (673-721)

• AAA domain (AAA_30) (340-546)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	49.938	99.753	0.498