Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   DQL77_RS10505 Genome accession   NZ_LS483484
Coordinates   2064346..2065389 (-) Length   347 a.a.
NCBI ID   WP_001017131.1    Uniprot ID   A0A0D1IMN4
Organism   Staphylococcus aureus strain NCTC13277     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 2059346..2070389
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQL77_RS10475 (NCTC13277_02004) - 2059767..2061023 (-) 1257 WP_001793983.1 aminopeptidase -
  DQL77_RS10480 (NCTC13277_02005) - 2061026..2061226 (-) 201 WP_000180460.1 DUF1128 family protein -
  DQL77_RS10485 (NCTC13277_02006) - 2061373..2061837 (+) 465 WP_000228670.1 low molecular weight protein-tyrosine-phosphatase -
  DQL77_RS10490 (NCTC13277_02007) - 2061844..2062119 (+) 276 WP_000428172.1 YtxH domain-containing protein -
  DQL77_RS10495 (NCTC13277_02008) - 2062397..2063614 (+) 1218 WP_000037085.1 YihY/virulence factor BrkB family protein -
  DQL77_RS10500 (NCTC13277_02009) vraR 2063727..2064356 (-) 630 WP_000153535.1 two-component system response regulator VraR Regulator
  DQL77_RS10505 (NCTC13277_02010) vraS 2064346..2065389 (-) 1044 WP_001017131.1 sensor histidine kinase Regulator
  DQL77_RS10510 (NCTC13277_02011) liaF 2065386..2066087 (-) 702 WP_000149064.1 cell wall-active antibiotics response protein LiaF -
  DQL77_RS10515 (NCTC13277_02012) - 2066102..2066488 (-) 387 WP_001110178.1 hypothetical protein -
  DQL77_RS10520 (NCTC13277_02013) map 2066705..2067463 (-) 759 WP_000636142.1 type I methionyl aminopeptidase -
  DQL77_RS10540 (NCTC13277_02014) - 2068163..2069149 (+) 987 WP_001014423.1 aromatic acid exporter family protein -
  DQL77_RS10545 (NCTC13277_02015) - 2069338..2069751 (-) 414 WP_001643743.1 hypothetical protein -
  DQL77_RS10550 - 2069780..2069890 (-) 111 WP_001790257.1 hypothetical protein -

Sequence


Protein


Download         Length: 347 a.a.        Molecular weight: 40044.52 Da        Isoelectric Point: 6.0577

>NTDB_id=1142571 DQL77_RS10505 WP_001017131.1 2064346..2065389(-) (vraS) [Staphylococcus aureus strain NCTC13277]
MNHYIRTIGSMLILVYSMLAAFLFIDKVFVNIIYFQGMFYTQIFGIPVFLFLNLIIILLCIIVGSVLAYKINQQNDWIKT
QIERSMEGETVGINDQNIEIYSETLDLYHTLVPLNQELHKLRLKTQNLTNENYNINDVKVKKIIEDERQRLARELHDSVS
QQLFAASMMLSAIKETKLEPPLDQQIPILEKMVQDSQLEMRALLLHLRPLGLKDKSLGEGIKDLVIDLQKKVPMKVVHEI
QDFKVPKGIEDHLFRITQEAISNTLRHSNGTKVTVELFNKDDYLLLRIQDNGKGFNVDEKLEQSYGLKNMRERALEIGAT
FHIVSLPDSGTRIEVKAPLNKEDSYDD

Nucleotide


Download         Length: 1044 bp        

>NTDB_id=1142571 DQL77_RS10505 WP_001017131.1 2064346..2065389(-) (vraS) [Staphylococcus aureus strain NCTC13277]
ATGAACCACTACATTAGAACAATTGGTTCAATGCTCATCTTAGTATATAGCATGCTAGCTGCATTTCTGTTCATCGATAA
AGTTTTTGTAAATATCATCTATTTTCAAGGTATGTTTTATACACAAATATTCGGAATACCAGTCTTTTTATTTTTAAATC
TCATCATCATATTATTGTGTATTATTGTTGGTTCGGTACTCGCTTACAAAATCAATCAGCAAAATGATTGGATTAAGACG
CAAATTGAGCGTTCAATGGAAGGCGAAACAGTTGGCATTAATGATCAAAATATAGAAATATATAGTGAAACGTTAGACTT
ATACCATACACTTGTACCTTTAAATCAAGAATTGCATAAGTTGCGACTTAAAACTCAAAACTTAACCAATGAAAATTATA
ATATTAATGATGTGAAAGTTAAAAAGATTATTGAAGATGAACGTCAAAGACTAGCACGAGAACTTCACGATTCTGTTAGT
CAGCAACTTTTTGCGGCAAGTATGATGCTTTCTGCTATCAAAGAAACGAAGTTAGAACCACCATTAGACCAACAAATTCC
GATTTTAGAGAAAATGGTTCAAGATTCGCAGCTAGAAATGCGTGCTTTGCTGTTACATTTAAGACCGCTTGGTTTAAAAG
ACAAATCTTTAGGTGAGGGTATTAAAGATTTAGTTATTGATTTACAAAAAAAAGTGCCAATGAAAGTTGTGCATGAAATA
CAAGATTTTAAAGTGCCTAAAGGTATTGAAGATCATTTGTTCAGAATTACACAGGAAGCAATTTCGAATACATTGCGTCA
TTCAAACGGTACAAAAGTGACAGTAGAATTGTTTAATAAAGACGATTATTTATTGTTGAGAATTCAAGACAATGGTAAAG
GTTTTAATGTTGATGAAAAATTAGAACAAAGTTATGGACTTAAAAATATGCGTGAAAGAGCTTTGGAAATTGGTGCAACG
TTCCATATTGTATCATTGCCAGATTCAGGTACACGTATCGAGGTGAAAGCACCTTTAAATAAGGAGGATTCGTATGACGA
TTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0D1IMN4

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

100

100

1


Multiple sequence alignment