Detailed information    

insolico Bioinformatically predicted

Overview


Name   HI0659   Type   Machinery gene
Locus tag   DQL19_RS01805 Genome accession   NZ_LS483480
Coordinates   358696..358992 (+) Length   98 a.a.
NCBI ID   WP_005650837.1    Uniprot ID   Q4QMQ7
Organism   Haemophilus influenzae strain NCTC13377     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 353696..363992
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQL19_RS09705 - 355126..355175 (+) 50 Protein_344 hypothetical protein -
  DQL19_RS09720 - 355219..355605 (+) 387 Protein_345 TonB-dependent receptor plug domain-containing protein -
  DQL19_RS01795 (NCTC13377_00351) - 355813..358074 (+) 2262 WP_241960400.1 TonB-dependent hemoglobin/transferrin/lactoferrin family receptor -
  DQL19_RS01800 (NCTC13377_00352) - 358344..358703 (+) 360 WP_077643740.1 type II toxin-antitoxin system RelE/ParE family toxin -
  DQL19_RS01805 (NCTC13377_00353) HI0659 358696..358992 (+) 297 WP_005650837.1 helix-turn-helix transcriptional regulator Machinery gene
  DQL19_RS01810 (NCTC13377_00354) - 359149..361065 (+) 1917 WP_077643739.1 ABC transporter ATP-binding protein -
  DQL19_RS01815 (NCTC13377_00355) - 361075..361611 (+) 537 WP_077643738.1 type I DNA topoisomerase -
  DQL19_RS01820 (NCTC13377_00356) - 361627..362178 (+) 552 WP_077643737.1 Sua5/YciO/YrdC/YwlC family protein -
  DQL19_RS01825 (NCTC13377_00357) aroE 362182..362988 (+) 807 WP_077643736.1 shikimate dehydrogenase -
  DQL19_RS01830 (NCTC13377_00359) - 363202..363765 (+) 564 WP_077643735.1 DNA-3-methyladenine glycosylase I -

Sequence


Protein


Download         Length: 98 a.a.        Molecular weight: 11092.94 Da        Isoelectric Point: 10.3139

>NTDB_id=1142476 DQL19_RS01805 WP_005650837.1 358696..358992(+) (HI0659) [Haemophilus influenzae strain NCTC13377]
MNKISPLGSNWNEFEQQIFNEEEIRESNLRVALIKELITSRQQLGISQKQLETLSGVKQPMIARIEKGQTNPQLETLLKL
LAPLGKTLSIVPLRVKNA

Nucleotide


Download         Length: 297 bp        

>NTDB_id=1142476 DQL19_RS01805 WP_005650837.1 358696..358992(+) (HI0659) [Haemophilus influenzae strain NCTC13377]
ATGAATAAAATCAGCCCATTAGGTTCAAATTGGAATGAGTTTGAACAGCAAATTTTCAATGAAGAAGAAATCCGAGAAAG
TAATTTGCGTGTAGCCTTAATTAAAGAATTGATTACTTCTCGCCAGCAACTTGGGATTTCCCAAAAACAACTTGAAACCT
TAAGCGGTGTGAAGCAACCTATGATTGCACGCATTGAAAAAGGACAAACGAATCCTCAGCTTGAAACGTTGTTAAAATTG
CTCGCTCCTTTAGGGAAAACCCTGTCGATTGTTCCTCTAAGGGTAAAAAATGCCTAA

Domains


Predicted by InterproScan.

(41-89)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB Q4QMQ7

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  HI0659 Haemophilus influenzae Rd KW20

100

100

1


Multiple sequence alignment