Detailed information
Bioinformatically predicted
Overview
| Name | pilP | Type | Machinery gene |
| Locus tag | DQM71_RS01515 | Genome accession | NZ_LS483472 |
| Coordinates | 319032..319559 (+) | Length | 175 a.a. |
| NCBI ID | WP_000695059.1 | Uniprot ID | A0A0D5YDP9 |
| Organism | Acinetobacter baumannii strain NCTC13421 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 314032..324559
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DQM71_RS01500 (NCTC13421_00298) | pilM | 316585..317643 (+) | 1059 | WP_002014066.1 | pilus assembly protein PilM | Machinery gene |
| DQM71_RS01505 (NCTC13421_00299) | pilN | 317643..318284 (+) | 642 | WP_000201229.1 | PilN domain-containing protein | Machinery gene |
| DQM71_RS01510 (NCTC13421_00300) | pilO | 318281..319021 (+) | 741 | WP_000076101.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| DQM71_RS01515 (NCTC13421_00301) | pilP | 319032..319559 (+) | 528 | WP_000695059.1 | pilus assembly protein PilP | Machinery gene |
| DQM71_RS01520 (NCTC13421_00302) | pilQ | 319622..321787 (+) | 2166 | WP_001017040.1 | type IV pilus secretin PilQ family protein | Machinery gene |
| DQM71_RS01525 (NCTC13421_00303) | aroK | 321799..322368 (+) | 570 | WP_000643712.1 | shikimate kinase AroK | - |
| DQM71_RS01530 (NCTC13421_00304) | aroB | 322397..323479 (+) | 1083 | WP_001193997.1 | 3-dehydroquinate synthase | - |
| DQM71_RS01535 (NCTC13421_00305) | - | 323495..324370 (+) | 876 | WP_000218810.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 175 a.a. Molecular weight: 19371.59 Da Isoelectric Point: 9.0270
>NTDB_id=1142358 DQM71_RS01515 WP_000695059.1 319032..319559(+) (pilP) [Acinetobacter baumannii strain NCTC13421]
MKIKQITLCVLASVVLVGCDSRIDAVNQEMANIRNQPPLPIEPAPIFTPVPQFNYAAHQLKSPFMPSSLAAELKIMAGKR
VYPNFSRAPQPLESYALEALNMKGSMRNNRGQILALIQTPDQQIERVQVGNYMGMNQGRITHISPTQIDLVEIVPDGREG
YVERPRTLVLIGPAP
MKIKQITLCVLASVVLVGCDSRIDAVNQEMANIRNQPPLPIEPAPIFTPVPQFNYAAHQLKSPFMPSSLAAELKIMAGKR
VYPNFSRAPQPLESYALEALNMKGSMRNNRGQILALIQTPDQQIERVQVGNYMGMNQGRITHISPTQIDLVEIVPDGREG
YVERPRTLVLIGPAP
Nucleotide
Download Length: 528 bp
>NTDB_id=1142358 DQM71_RS01515 WP_000695059.1 319032..319559(+) (pilP) [Acinetobacter baumannii strain NCTC13421]
ATGAAAATTAAGCAAATTACTCTTTGTGTTTTGGCGAGTGTTGTGCTTGTCGGTTGTGATTCAAGAATTGATGCAGTAAA
TCAGGAAATGGCCAATATTCGTAATCAGCCGCCACTCCCTATTGAACCAGCACCGATTTTTACTCCTGTACCACAATTTA
ATTACGCTGCTCATCAATTAAAAAGCCCATTTATGCCAAGTTCTCTTGCTGCCGAGCTCAAGATTATGGCGGGGAAACGG
GTTTATCCGAATTTCTCACGTGCGCCGCAACCACTCGAAAGTTATGCACTTGAAGCTTTAAATATGAAAGGGAGCATGCG
TAATAATCGAGGGCAGATATTGGCCCTGATCCAGACACCGGATCAGCAGATTGAACGGGTACAAGTGGGTAACTATATGG
GTATGAATCAGGGCCGTATCACCCATATTAGTCCAACCCAGATTGATCTGGTTGAAATCGTACCGGATGGTCGAGAAGGC
TATGTCGAAAGACCGAGAACCTTGGTCTTGATTGGGCCTGCACCCTAA
ATGAAAATTAAGCAAATTACTCTTTGTGTTTTGGCGAGTGTTGTGCTTGTCGGTTGTGATTCAAGAATTGATGCAGTAAA
TCAGGAAATGGCCAATATTCGTAATCAGCCGCCACTCCCTATTGAACCAGCACCGATTTTTACTCCTGTACCACAATTTA
ATTACGCTGCTCATCAATTAAAAAGCCCATTTATGCCAAGTTCTCTTGCTGCCGAGCTCAAGATTATGGCGGGGAAACGG
GTTTATCCGAATTTCTCACGTGCGCCGCAACCACTCGAAAGTTATGCACTTGAAGCTTTAAATATGAAAGGGAGCATGCG
TAATAATCGAGGGCAGATATTGGCCCTGATCCAGACACCGGATCAGCAGATTGAACGGGTACAAGTGGGTAACTATATGG
GTATGAATCAGGGCCGTATCACCCATATTAGTCCAACCCAGATTGATCTGGTTGAAATCGTACCGGATGGTCGAGAAGGC
TATGTCGAAAGACCGAGAACCTTGGTCTTGATTGGGCCTGCACCCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilP | Acinetobacter baumannii D1279779 |
98.286 |
100 |
0.983 |
| comL | Acinetobacter baylyi ADP1 |
71.839 |
99.429 |
0.714 |