Detailed information NTG0114234

Bioinformatically predicted

Overview

• Name: comH
• Type: Machinery gene
• Locus tag: HPOKI673_RS07325
• Genome accession: NZ_CP006825
• Coordinates: 1515578..1516999 (-)
• Length: 473 a.a.
• NCBI ID: WP_038419222.1
• Uniprot ID: -
• Organism: Helicobacter pylori oki673
• Function: import of DNA into the periplasm (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1510578..1521999

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HPOKI673_RS07300 (HPOKI673_07615)	recG	1511727..1513592 (-)	1866	WP_025314214.1	ATP-dependent DNA helicase RecG	-
HPOKI673_RS07305 (HPOKI673_07620)	-	1513674..1514012 (+)	339	WP_025314215.1	hypothetical protein	-
HPOKI673_RS07310 (HPOKI673_07625)	-	1514016..1514651 (+)	636	WP_025223349.1	outer membrane protein	-
HPOKI673_RS07315 (HPOKI673_07630)	-	1514648..1515400 (-)	753	WP_025223350.1	exodeoxyribonuclease III	-
HPOKI673_RS07325 (HPOKI673_07640)	comH	1515578..1516999 (-)	1422	WP_038419222.1	hypothetical protein	Machinery gene
HPOKI673_RS07330 (HPOKI673_07645)	dnaA	1517239..1518606 (-)	1368	WP_025314217.1	chromosomal replication initiator protein DnaA	-
HPOKI673_RS07335 (HPOKI673_07650)	-	1518760..1519296 (+)	537	WP_025223353.1	purine-nucleoside phosphorylase	-
HPOKI673_RS07340 (HPOKI673_07655)	-	1519343..1519582 (+)	240	WP_000461845.1	DUF2443 domain-containing protein	-
HPOKI673_RS07345 (HPOKI673_07660)	glmS	1519583..1521376 (+)	1794	WP_025314218.1	glutamine--fructose-6-phosphate transaminase (isomerizing)	-

Sequence

Protein

• Length: 473 a.a.
• Molecular weight: 54450.32 Da
• Isoelectric Point: 6.3626

>NTDB_id=114234 HPOKI673_RS07325 WP_038419222.1 1515578..1516999(-) (comH) [Helicobacter pylori oki673]
MSFFLTFFNPLQALVIELLEEIKTSPHKSTFKAKVLDSKEPRQVLGVYNISPYKKLTLTITHISTAIVYQPLDEKLSLET
TLNPNRPTIPRNTQIVFSSKELKEPHPHQMPSLNAPIQKPQNKPTSSQQSLQNFSYPESKLGSKNPKNSLLQPLAIPNKI
SPTNEVQTPTNDTKPPLKHSLEDQENNLFVAPPTEKTLPNNNPNADINEHNESNENRDNVEKQAIRDPNIKEFACGKWVY
DDENLQAYRPSILKRIDENKQTATDITPCDYSNAENKSGKITTPYTKISVHKTEPLEEPQTFEAKNNFTILQARSSTEKC
KRARTRKDGTTRQCYLIEEPLKQAWESEYEITTQLVKAIYERPKQDDQIEPTFYETSELAYSSTRKSEITHNELDLNEKF
MEFVEVYEGHYLNDIIKESSEYKEWVKNHVRFKEGVCMVLEIEEQPRAKSTPLSIENSKVVCVKKGNYLFNEV

Nucleotide

• Length: 1422 bp

>NTDB_id=114234 HPOKI673_RS07325 WP_038419222.1 1515578..1516999(-) (comH) [Helicobacter pylori oki673]
CTGTCTTTCTTTTTGACTTTCTTTAACCCTCTTCAAGCCCTTGTGATCGAGCTTTTAGAAGAAATCAAAACTTCGCCGCA
TAAAAGCACTTTTAAAGCTAAAGTGCTTGATTCTAAAGAACCAAGACAAGTTTTAGGCGTTTATAATATCTCCCCATACA
AAAAACTCACGCTCACTATCACCCACATATCCACCGCAATTGTCTATCAACCCCTTGATGAAAAACTTTCTTTAGAAACG
ACCTTAAACCCTAACCGCCCTACTATTCCCAGAAACACCCAAATTGTTTTTTCTTCAAAAGAATTGAAAGAGCCGCACCC
ACACCAAATGCCTTCTTTAAACGCACCCATACAAAAACCACAAAACAAACCCACTTCATCGCAACAATCTCTTCAAAACT
TTTCTTACCCAGAGTCCAAACTAGGCTCTAAAAACCCTAAAAACAGCCTTTTACAGCCTTTAGCCATTCCTAATAAAATA
AGCCCCACTAATGAAGTTCAAACGCCAACAAACGACACTAAACCCCCTTTAAAGCATTCTTTAGAAGATCAAGAAAATAA
CCTTTTTGTAGCGCCACCCACTGAAAAAACGCTCCCTAACAACAACCCTAACGCTGATATTAATGAACACAATGAAAGCA
ATGAGAATAGGGATAATGTGGAAAAACAAGCCATTAGAGATCCTAATATCAAAGAGTTTGCGTGCGGGAAGTGGGTCTAT
GATGATGAAAATTTACAAGCCTATCGCCCAAGCATTTTAAAACGCATTGATGAAAACAAACAGACTGCGACAGACATTAC
CCCTTGCGACTACAGCAACGCTGAAAATAAAAGCGGTAAAATCACTACCCCCTATACTAAAATCTCTGTTCATAAAACAG
AGCCTTTAGAAGAGCCACAAACCTTTGAAGCTAAAAACAATTTTACCATCCTCCAAGCCAGAAGCTCTACAGAAAAATGC
AAAAGAGCCAGAACACGAAAAGACGGCACGACTAGGCAATGCTACCTAATAGAAGAGCCTTTAAAACAAGCATGGGAGAG
TGAGTATGAAATCACCACGCAATTAGTGAAAGCCATTTATGAGCGCCCCAAACAAGACGATCAGATAGAGCCGACTTTCT
ATGAAACCAGCGAATTGGCTTATTCTTCCACACGAAAAAGCGAAATAACGCATAATGAATTGGATTTGAATGAAAAGTTC
ATGGAATTTGTGGAAGTGTATGAGGGGCATTATTTAAACGATATAATCAAAGAAAGCAGTGAATACAAAGAATGGGTTAA
AAACCATGTGCGCTTTAAAGAAGGGGTGTGCATGGTTTTAGAAATAGAAGAACAACCACGAGCCAAAAGCACGCCCTTGA
GTATTGAAAACTCTAAAGTTGTTTGTGTCAAAAAGGGGAATTATTTATTCAACGAAGTTTAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comH	Helicobacter pylori 26695	92.812	100	0.928