Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   DQN71_RS08085 Genome accession   NZ_LS483471
Coordinates   1549140..1550237 (-) Length   365 a.a.
NCBI ID   WP_373279003.1    Uniprot ID   A0A512ABE6
Organism   Streptococcus cristatus strain NCTC13807     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 1544140..1555237
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQN71_RS08065 trpB 1545221..1546402 (-) 1182 WP_015605521.1 tryptophan synthase subunit beta -
  DQN71_RS08070 (NCTC13807_01548) - 1546790..1547329 (-) 540 WP_015605522.1 VanZ family protein -
  DQN71_RS08075 (NCTC13807_01549) rlmN 1547316..1548404 (-) 1089 WP_015605523.1 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN -
  DQN71_RS08080 (NCTC13807_01550) - 1548414..1548977 (-) 564 WP_015605524.1 YutD family protein -
  DQN71_RS08085 (NCTC13807_01551) sepM 1549140..1550237 (-) 1098 WP_373279003.1 SepM family pheromone-processing serine protease Regulator
  DQN71_RS08090 (NCTC13807_01552) coaD 1550230..1550715 (-) 486 WP_015605526.1 pantetheine-phosphate adenylyltransferase -
  DQN71_RS08095 (NCTC13807_01553) rsmD 1550705..1551244 (-) 540 WP_015605527.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  DQN71_RS08100 (NCTC13807_01554) yidD 1551330..1551590 (-) 261 WP_015605528.1 membrane protein insertion efficiency factor YidD -
  DQN71_RS08105 (NCTC13807_01555) - 1551587..1552318 (-) 732 WP_015605529.1 pseudouridine synthase -
  DQN71_RS08110 (NCTC13807_01556) scpB 1552452..1552997 (-) 546 WP_005590827.1 SMC-Scp complex subunit ScpB -
  DQN71_RS08115 (NCTC13807_01557) - 1552990..1553700 (-) 711 WP_015605530.1 segregation/condensation protein A -
  DQN71_RS08120 (NCTC13807_01558) xerD 1553703..1554434 (-) 732 WP_015605531.1 site-specific tyrosine recombinase XerD -
  DQN71_RS08125 (NCTC13807_01559) cbpB 1554431..1554892 (-) 462 WP_015605532.1 cyclic-di-AMP-binding protein CbpB -

Sequence


Protein


Download         Length: 365 a.a.        Molecular weight: 39517.01 Da        Isoelectric Point: 4.9381

>NTDB_id=1142327 DQN71_RS08085 WP_373279003.1 1549140..1550237(-) (sepM) [Streptococcus cristatus strain NCTC13807]
MNNDMTNPKTMTKEDKRGLKVVGCAGLASIIVVVLFLFSFIVPLPYYIEVPGGAEDIRKVLTVDGKEDQAAGSYNFVTVG
IQHATFAHLVYAWLTPFTDIYSAQDMTGGSSDAEYMRINQFYMETSQNMAKYQGLKTAGKDIKMNYLGVYVLKVAQDSTF
KGILNIADTVTGVNDKTFESSEDLVKYVNSQALGDSVKVTYEEDGETKTATGKIIKLENGKNGIGISLIDRTEVNSSVPI
EFSTEGIGGPSAGLMFSLAIYTQLANPDLRDGRVIAGTGSIDREGKVGDIGGIDKKVVSAAKIGATIFFAPDNPVSEEEK
KANPKAKTNYEAALEAAKEIKTDMKIVPVKTLQDAIDYLEKTKKS

Nucleotide


Download         Length: 1098 bp        

>NTDB_id=1142327 DQN71_RS08085 WP_373279003.1 1549140..1550237(-) (sepM) [Streptococcus cristatus strain NCTC13807]
ATGAATAATGACATGACAAATCCGAAAACGATGACGAAGGAAGATAAACGTGGTTTAAAAGTAGTTGGTTGTGCTGGACT
GGCCTCTATTATTGTGGTTGTGCTCTTCCTTTTCTCTTTCATTGTTCCCCTACCTTACTACATTGAGGTGCCTGGAGGCG
CAGAAGACATTCGGAAGGTTCTGACTGTGGACGGAAAAGAGGATCAAGCGGCAGGTTCCTACAATTTTGTGACTGTTGGG
ATCCAGCATGCGACCTTTGCCCATCTGGTCTACGCTTGGTTGACGCCTTTTACGGATATTTATTCGGCTCAGGATATGAC
GGGTGGCTCGAGTGATGCTGAGTATATGCGCATTAACCAATTTTATATGGAAACGTCGCAGAATATGGCCAAATACCAAG
GTCTCAAGACCGCAGGAAAAGATATCAAGATGAACTATCTGGGTGTCTATGTTCTGAAAGTAGCTCAGGATTCGACCTTT
AAAGGAATTTTGAATATTGCGGATACGGTGACGGGAGTCAATGACAAAACCTTTGAAAGCTCAGAAGATTTGGTCAAATA
TGTGAATTCTCAGGCCTTGGGCGATAGTGTCAAGGTGACCTACGAGGAAGATGGAGAAACCAAGACAGCGACTGGGAAAA
TCATCAAGCTGGAAAATGGAAAAAACGGAATTGGCATTAGTTTGATTGACCGCACGGAAGTCAACAGCAGTGTTCCGATT
GAATTTTCAACTGAAGGTATCGGTGGTCCTAGTGCTGGCCTCATGTTTAGCCTAGCCATCTATACTCAATTGGCCAATCC
TGACCTGCGAGACGGCCGCGTGATTGCGGGAACGGGTAGCATTGACAGAGAAGGTAAAGTTGGAGATATTGGTGGGATTG
ACAAAAAAGTCGTCTCTGCGGCCAAAATCGGAGCGACAATCTTCTTTGCCCCAGACAATCCTGTCAGCGAGGAAGAAAAA
AAGGCTAATCCTAAAGCCAAAACTAACTATGAAGCAGCGCTTGAAGCAGCCAAGGAAATCAAAACGGATATGAAAATCGT
GCCGGTTAAGACGCTTCAGGACGCGATTGATTATTTAGAAAAAACCAAAAAATCTTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A512ABE6

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

62.687

91.781

0.575


Multiple sequence alignment