Detailed information NTG0114220

Bioinformatically predicted

Overview

• Name: comH
• Type: Machinery gene
• Locus tag: HPOKI422_RS07460
• Genome accession: NZ_CP006824
• Coordinates: 1547378..1548817 (-)
• Length: 479 a.a.
• NCBI ID: WP_025366626.1
• Uniprot ID: -
• Organism: Helicobacter pylori oki422
• Function: import of DNA into the periplasm (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1542378..1553817

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HPOKI422_RS07435 (HPOKI422_07745)	recG	1543503..1545374 (-)	1872	WP_025276468.1	ATP-dependent DNA helicase RecG	-
HPOKI422_RS07440 (HPOKI422_07750)	-	1545456..1545812 (+)	357	WP_025276469.1	hypothetical protein	-
HPOKI422_RS07445 (HPOKI422_07755)	-	1545816..1546451 (+)	636	WP_025366625.1	outer membrane protein	-
HPOKI422_RS07450 (HPOKI422_07760)	-	1546448..1547200 (-)	753	WP_015428408.1	exodeoxyribonuclease III	-
HPOKI422_RS07460 (HPOKI422_07770)	comH	1547378..1548817 (-)	1440	WP_025366626.1	hypothetical protein	Machinery gene
HPOKI422_RS07470 (HPOKI422_07775)	dnaA	1549046..1550413 (-)	1368	WP_015428410.1	chromosomal replication initiator protein DnaA	-
HPOKI422_RS07475 (HPOKI422_07780)	-	1550565..1551107 (+)	543	WP_025310056.1	purine-nucleoside phosphorylase	-
HPOKI422_RS07480 (HPOKI422_07785)	-	1551150..1551389 (+)	240	WP_000461832.1	DUF2443 domain-containing protein	-
HPOKI422_RS07485 (HPOKI422_07790)	glmS	1551390..1553183 (+)	1794	WP_015428412.1	glutamine--fructose-6-phosphate transaminase (isomerizing)	-

Sequence

Protein

• Length: 479 a.a.
• Molecular weight: 54893.81 Da
• Isoelectric Point: 6.6633

>NTDB_id=114220 HPOKI422_RS07460 WP_025366626.1 1547378..1548817(-) (comH) [Helicobacter pylori oki422]
MKKSLCLSFFLTFSNPLQALVIELLEEIKTSPHKGTFKAKVLDSKEPRQVLGVYNISPHKKLTLTITHISTAIVYQPLDE
KLSLETTLNPNRPTIPRNTQIIFSSKELKESHSHQMPSLNAPMQKPQNKPHSSQQPSQNFSYPESKLGSKNSKNSLLQPL
AILSKISPTNETQTPTNDTKPPLKHSSEDQENNLFIAPPTEKTLPNNIPNTDISENNESNENKDNVEKQATRDPNIKEFA
CGKWVYDDENLQAYRQSILKRVDEDKQTATDITPCDYSTAENKSGKIITPYTKISVHKTEPLEEPQTFEAKNNFAILQAR
SSTEKCKRARARKDGTTRQCYLIEEPLKQAWESEYEITTQLVKAIYERPKQDDQVEPTFYETSELAYSSTRKSEITQNEL
NLNEKFMEFVEVYEGHYLNDIVKESSEYKEWVKNHVRFKEGVCMVLEIEEQPRAKSTPLSIENSRVVCVKKGNYLFNEV

Nucleotide

• Length: 1440 bp

>NTDB_id=114220 HPOKI422_RS07460 WP_025366626.1 1547378..1548817(-) (comH) [Helicobacter pylori oki422]
ATGAAAAAATCCCTTTGTCTGTCTTTCTTTCTGACTTTCTCTAACCCTCTTCAAGCCCTTGTGATCGAGCTTTTAGAAGA
GATCAAAACTTCGCCGCATAAAGGCACTTTTAAGGCTAAAGTCCTTGATTCTAAAGAACCAAGACAAGTTTTAGGCGTTT
ATAATATCTCCCCACACAAAAAACTCACGCTCACTATCACCCACATATCCACTGCAATTGTTTATCAACCCCTTGATGAA
AAACTTTCTTTAGAAACGACCTTAAACCCTAACCGCCCTACTATTCCCAGAAACACCCAAATTATTTTTTCTTCAAAAGA
ATTGAAAGAGTCGCACTCGCACCAAATGCCTTCTTTAAACGCACCCATGCAAAAACCACAAAACAAGCCCCATTCATCGC
AACAACCTTCTCAAAACTTTTCTTACCCAGAGTCCAAACTAGGCTCTAAAAACTCTAAAAACAGCCTTTTGCAGCCTTTA
GCAATTCTTAGCAAAATAAGTCCCACTAACGAAACTCAAACGCCAACAAACGACACTAAACCCCCTTTAAAGCATTCTTC
AGAAGATCAAGAAAACAACCTCTTTATAGCGCCACCCACTGAAAAAACGCTCCCTAATAACATCCCTAACACTGATATTA
GTGAAAACAATGAAAGCAATGAAAATAAGGATAATGTGGAAAAACAAGCCACTAGAGATCCTAATATTAAAGAATTTGCG
TGCGGGAAGTGGGTCTATGACGATGAAAACTTGCAAGCCTATCGCCAAAGCATTTTAAAACGCGTTGATGAAGACAAACA
GACTGCGACAGATATTACCCCTTGCGATTACAGCACCGCTGAAAATAAAAGCGGTAAAATCATTACCCCCTATACTAAAA
TCTCCGTTCATAAAACAGAGCCTTTAGAAGAGCCACAAACTTTTGAAGCTAAAAACAATTTCGCCATTCTTCAAGCCAGA
AGCTCTACAGAAAAATGCAAAAGGGCTAGAGCAAGAAAAGACGGCACAACTAGGCAATGCTATCTGATAGAAGAGCCTTT
AAAACAAGCATGGGAGAGTGAGTATGAAATCACCACGCAATTAGTGAAAGCCATTTATGAGCGCCCTAAACAAGACGACC
AAGTAGAGCCAACTTTTTATGAAACCAGCGAATTGGCTTATTCTTCCACACGAAAAAGCGAAATAACGCAAAATGAATTG
AATTTGAATGAAAAATTCATGGAATTTGTGGAAGTGTATGAGGGGCATTATTTAAACGATATAGTCAAAGAGAGCAGTGA
ATATAAAGAATGGGTTAAAAACCATGTGCGCTTTAAAGAAGGGGTGTGCATGGTTTTAGAAATAGAAGAACAACCACGAG
CTAAAAGCACGCCTTTGAGCATTGAAAACTCTCGTGTGGTGTGTGTCAAAAAGGGGAATTATTTATTCAACGAAGTTTGA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comH	Helicobacter pylori 26695	96.66	100	0.967