Detailed information NTG0114191

Bioinformatically predicted

Overview

• Name: comH
• Type: Machinery gene
• Locus tag: HPOKI154_RS07370
• Genome accession: NZ_CP006823
• Coordinates: 1520185..1521624 (-)
• Length: 479 a.a.
• NCBI ID: WP_025367092.1
• Uniprot ID: -
• Organism: Helicobacter pylori oki154
• Function: import of DNA into the periplasm (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1515185..1526624

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HPOKI154_RS07345 (HPOKI154_07625)	recG	1516334..1518199 (-)	1866	WP_025223347.1	ATP-dependent DNA helicase RecG	-
HPOKI154_RS07350 (HPOKI154_07630)	-	1518281..1518619 (+)	339	WP_025367089.1	hypothetical protein	-
HPOKI154_RS07355 (HPOKI154_07635)	-	1518623..1519258 (+)	636	WP_025367090.1	outer membrane protein	-
HPOKI154_RS07360 (HPOKI154_07640)	-	1519255..1520007 (-)	753	WP_025367091.1	exodeoxyribonuclease III	-
HPOKI154_RS07370 (HPOKI154_07650)	comH	1520185..1521624 (-)	1440	WP_025367092.1	hypothetical protein	Machinery gene
HPOKI154_RS07375 (HPOKI154_07655)	dnaA	1521845..1523212 (-)	1368	WP_025367093.1	chromosomal replication initiator protein DnaA	-
HPOKI154_RS07380 (HPOKI154_07660)	-	1523365..1523901 (+)	537	WP_025223353.1	purine-nucleoside phosphorylase	-
HPOKI154_RS07385 (HPOKI154_07665)	-	1523948..1524187 (+)	240	WP_025367094.1	DUF2443 family protein	-
HPOKI154_RS07390 (HPOKI154_07670)	glmS	1524188..1525981 (+)	1794	WP_025314218.1	glutamine--fructose-6-phosphate transaminase (isomerizing)	-

Sequence

Protein

• Length: 479 a.a.
• Molecular weight: 55022.06 Da
• Isoelectric Point: 6.5800

>NTDB_id=114191 HPOKI154_RS07370 WP_025367092.1 1520185..1521624(-) (comH) [Helicobacter pylori oki154]
MKKTLCLSFFLTFSNPLQALVIELLEEIKTSPHKGTFKAKVLDSKEPRQVLGVYNISPHKKLTLTITHISTAIVYQPLDE
KLSLETTLNPNRPTIPRNTQIVFSSKELKEPHPHQMPSLNAPIQKPQNKPTSSQQSLQNFSYPESKLGSKNPKNSLLQPL
AIPNKISPTNEVQTPTNDTKPPLKHSLEDQENNLFVAPPTEKTLPNNNPNADINEHNESNENRDNVEKQAIRDPNIKEFA
CGKWVYDDENLQAYRPSILKRIDEDKQTATDITPCDYSNAENKSGKITTPYTKISVHKTEPLEEPQTFEAKNNFTILQAR
SSTEKCKRARTRKDGTTRQCYLIEEPLKQAWESEYEITTQLVKAIYERPKQDDQIEPTFYETSELAYSSTRKSEITHNEL
DLNEKFMEFVEVYEGHYLNDIIKESSEYKEWVKNHVRFKEGVCMVLEIEEQPRAKSTPLSIENSKVVCVKKGNYLFNEV

Nucleotide

• Length: 1440 bp

>NTDB_id=114191 HPOKI154_RS07370 WP_025367092.1 1520185..1521624(-) (comH) [Helicobacter pylori oki154]
ATGAAAAAAACCCTTTGTCTGTCTTTCTTTTTGACTTTCTCTAACCCTCTTCAAGCCCTTGTGATCGAGCTTTTAGAAGA
AATCAAAACTTCGCCGCATAAAGGCACTTTTAAGGCTAAAGTCCTTGATTCTAAAGAACCAAGACAAGTTTTAGGCGTTT
ATAATATCTCCCCACACAAAAAACTCACGCTCACTATCACCCACATATCCACTGCAATTGTCTATCAACCCCTTGATGAA
AAACTTTCTTTAGAAACGACCTTAAACCCTAACCGCCCTACTATTCCCAGAAACACCCAAATTGTTTTTTCTTCAAAAGA
ATTGAAAGAGCCGCACCCGCACCAAATGCCTTCTTTAAACGCGCCCATACAAAAACCACAAAACAAACCCACTTCATCGC
AACAATCTCTTCAAAACTTTTCTTACCCAGAGTCCAAACTAGGCTCTAAAAACCCTAAAAACAGCCTTTTACAGCCTTTA
GCCATTCCTAATAAAATAAGCCCCACTAATGAAGTTCAAACGCCAACAAACGACACTAAACCCCCTTTAAAGCATTCTTT
AGAAGATCAAGAAAACAACCTTTTTGTAGCGCCACCCACTGAAAAAACGCTCCCTAACAACAACCCTAACGCTGATATTA
ATGAACACAATGAAAGCAATGAGAATAGGGATAATGTGGAAAAACAAGCCATTAGAGATCCTAATATCAAAGAATTTGCG
TGCGGGAAGTGGGTCTATGATGATGAAAATTTACAAGCCTACCGCCCAAGCATTTTAAAACGCATTGATGAAGACAAACA
GACTGCGACAGACATTACCCCTTGCGACTACAGCAACGCTGAAAATAAAAGCGGTAAAATCACTACCCCCTATACTAAAA
TCTCTGTTCATAAAACAGAGCCTTTAGAAGAGCCACAAACCTTTGAAGCTAAAAACAATTTTACCATCCTCCAAGCCAGA
AGCTCTACAGAAAAATGCAAAAGAGCCAGAACACGAAAAGACGGCACGACTAGGCAATGCTACCTAATAGAAGAGCCTTT
AAAACAAGCATGGGAGAGTGAGTATGAAATCACCACGCAATTAGTGAAAGCCATTTATGAGCGCCCCAAACAAGACGATC
AGATAGAGCCGACTTTCTATGAAACCAGCGAATTGGCTTATTCTTCCACACGAAAAAGCGAAATAACGCATAATGAATTG
GATTTGAATGAAAAGTTCATGGAATTTGTGGAAGTGTATGAGGGGCATTATTTAAACGATATAATCAAAGAAAGCAGTGA
ATACAAAGAATGGGTTAAAAACCATGTGCGCTTTAAAGAAGGGGTGTGCATGGTTTTAGAAATAGAAGAACAACCACGAG
CCAAAAGCACGCCCTTGAGTATTGAAAACTCTAAAGTTGTTTGTGTCAAAAAGGGGAATTATTTATTCAACGAAGTTTAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comH	Helicobacter pylori 26695	93.737	100	0.937