Detailed information NTG0114172

Bioinformatically predicted

Overview

• Name: comH
• Type: Machinery gene
• Locus tag: HPOKI128_RS06130
• Genome accession: NZ_CP006822
• Coordinates: 1286905..1288344 (+)
• Length: 479 a.a.
• NCBI ID: WP_025288514.1
• Uniprot ID: -
• Organism: Helicobacter pylori oki128
• Function: import of DNA into the periplasm (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1281905..1293344

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HPOKI128_RS06110 (HPOKI128_06325)	glmS	1282547..1284340 (-)	1794	WP_025288511.1	glutamine--fructose-6-phosphate transaminase (isomerizing)	-
HPOKI128_RS06115 (HPOKI128_06330)	-	1284341..1284580 (-)	240	WP_000461845.1	DUF2443 domain-containing protein	-
HPOKI128_RS06120 (HPOKI128_06335)	-	1284627..1285163 (-)	537	WP_025288512.1	purine-nucleoside phosphorylase	-
HPOKI128_RS06125 (HPOKI128_06340)	dnaA	1285317..1286684 (+)	1368	WP_025288513.1	chromosomal replication initiator protein DnaA	-
HPOKI128_RS06130 (HPOKI128_06345)	comH	1286905..1288344 (+)	1440	WP_025288514.1	hypothetical protein	Machinery gene
HPOKI128_RS06140 (HPOKI128_06355)	-	1288522..1289274 (+)	753	WP_025288515.1	exodeoxyribonuclease III	-
HPOKI128_RS06145 (HPOKI128_06360)	-	1289271..1289906 (-)	636	WP_025288516.1	outer membrane protein	-
HPOKI128_RS06150 (HPOKI128_06365)	-	1289910..1290254 (-)	345	WP_025288517.1	hypothetical protein	-
HPOKI128_RS06155 (HPOKI128_06370)	recG	1290336..1292201 (+)	1866	WP_025288518.1	ATP-dependent DNA helicase RecG	-

Sequence

Protein

• Length: 479 a.a.
• Molecular weight: 55042.04 Da
• Isoelectric Point: 6.5800

>NTDB_id=114172 HPOKI128_RS06130 WP_025288514.1 1286905..1288344(+) (comH) [Helicobacter pylori oki128]
MKKTLCLSFFLTFSNPLQALVIELLEEIKTSPHKGTFKAKVLDSKEPRQVLGVYNISPHKKLTLTITHISTAIVYQPLDE
KLSLETTLNPNRPTIPRNTQIVFSSKELKESHPHQMPSLNVPIQKPQNKPNSSQQSLQNFSYPESKLGSKNPKNSLLQPL
AIPNKISPTNEVQTPTNDTKPPLKHSSEDQENNLFVVPPTEKTLPNNTPNADINEHDESNENRDNVEKQAIRDPNIKEFA
CGKWVYDDENLQAYRPSILKRIDENKQTATDITPCDYSNAENKSGKITTPYTKISVHKTEPLEEPQTFEAKNNFTILQAR
SSTEKCKRARTRKDGTTRQCYLIEEPLKQAWESEYEITTQLVKAIYERPKQDDQIEPTFYETSELAYSSTRKSEITHNEL
DLNEKFMEFVEVYEGHYLNDIIKESSEYKEWVKNHVRFKEGVCMVLEIEEQPRAKSTPLSIENSKVVCVKKGNYLFNEV

Nucleotide

• Length: 1440 bp

>NTDB_id=114172 HPOKI128_RS06130 WP_025288514.1 1286905..1288344(+) (comH) [Helicobacter pylori oki128]
ATGAAAAAAACCCTTTGTCTGTCTTTCTTTCTGACTTTCTCTAACCCTCTTCAAGCCCTTGTGATCGAGCTTTTAGAAGA
AATCAAAACTTCGCCGCATAAAGGCACTTTTAAAGCTAAAGTGCTTGATTCTAAAGAACCAAGACAAGTTTTAGGCGTTT
ATAATATCTCCCCACACAAAAAACTCACGCTCACTATCACCCACATATCCACTGCAATTGTCTATCAACCCCTTGATGAA
AAACTTTCTTTAGAAACGACCTTAAACCCTAACCGCCCTACTATTCCCAGAAACACCCAAATTGTTTTTTCTTCAAAAGA
ATTGAAAGAGTCGCACCCGCACCAAATGCCTTCTTTAAACGTGCCCATACAAAAACCACAAAACAAACCCAATTCATCGC
AACAATCTCTTCAAAACTTTTCTTACCCAGAGTCCAAACTAGGCTCTAAAAACCCTAAAAACAGCCTTTTACAGCCTTTA
GCCATTCCTAATAAAATAAGCCCCACTAATGAAGTTCAAACGCCAACAAACGACACTAAACCCCCTTTAAAGCATTCTTC
AGAAGATCAAGAAAACAACCTTTTTGTAGTGCCACCCACTGAAAAAACGCTCCCTAACAACACCCCTAACGCTGATATTA
ATGAACACGATGAAAGCAATGAGAATAGGGATAATGTGGAAAAACAAGCCATTAGAGATCCCAATATCAAAGAATTTGCG
TGCGGGAAGTGGGTCTATGATGATGAAAATTTACAAGCCTACCGCCCAAGCATTTTAAAACGCATTGATGAAAACAAACA
GACTGCGACAGACATTACCCCTTGCGATTACAGCAACGCTGAAAATAAAAGCGGTAAAATCACTACCCCCTATACTAAAA
TCTCCGTTCATAAAACAGAGCCTTTAGAAGAGCCACAAACCTTTGAAGCTAAAAACAATTTTACCATCCTCCAAGCCAGA
AGCTCTACAGAAAAATGCAAAAGAGCTAGAACACGAAAAGACGGCACGACTAGGCAATGTTATCTGATAGAAGAGCCTTT
AAAACAAGCATGGGAGAGTGAGTATGAAATCACCACGCAATTAGTGAAAGCCATTTATGAGCGCCCCAAACAAGACGATC
AAATAGAGCCGACTTTTTATGAAACCAGCGAATTGGCTTATTCTTCCACACGAAAAAGCGAAATAACGCATAATGAATTG
GATTTGAATGAAAAGTTCATGGAATTTGTGGAAGTGTATGAGGGGCATTATTTAAACGATATAATCAAAGAAAGCAGTGA
ATACAAAGAATGGGTTAAAAACCATGTGCGCTTTAAAGAAGGGGTGTGCATGGTTTTAGAAATAGAAGAGCAACCACGAG
CCAAAAGCACGCCCTTGAGTATTGAAAACTCTAAAGTTGTTTGTGTCAAAAAGGGGAATTATTTATTCAACGAAGTTTAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comH	Helicobacter pylori 26695	93.737	100	0.937