Detailed information
Bioinformatically predicted
Overview
| Name | comQ | Type | Machinery gene |
| Locus tag | DQN58_RS09295 | Genome accession | NZ_LS483443 |
| Coordinates | 1916150..1916452 (-) | Length | 100 a.a. |
| NCBI ID | WP_006718982.1 | Uniprot ID | E6KYX6 |
| Organism | Aggregatibacter segnis ATCC 33393 strain NCTC 10977 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1911150..1921452
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DQN58_RS09280 (NCTC10977_01855) | - | 1911817..1912257 (+) | 441 | WP_006718975.1 | DNA polymerase III subunit psi | - |
| DQN58_RS09285 (NCTC10977_01856) | rimI | 1912270..1912713 (+) | 444 | WP_006718977.1 | ribosomal protein S18-alanine N-acetyltransferase | - |
| DQN58_RS09290 (NCTC10977_01857) | recC | 1912716..1916111 (-) | 3396 | WP_006718979.1 | exodeoxyribonuclease V subunit gamma | - |
| DQN58_RS09295 (NCTC10977_01858) | comQ | 1916150..1916452 (-) | 303 | WP_006718982.1 | DUF5374 domain-containing protein | Machinery gene |
| DQN58_RS09300 (NCTC10977_01859) | - | 1916427..1917122 (-) | 696 | WP_006718983.1 | DUF2572 family protein | - |
| DQN58_RS09305 (NCTC10977_01860) | comO | 1917119..1917862 (-) | 744 | WP_006718985.1 | type II secretion system protein J | Machinery gene |
| DQN58_RS09310 (NCTC10977_01861) | comN | 1917849..1918367 (-) | 519 | WP_006718987.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | Machinery gene |
| DQN58_RS09330 (NCTC10977_01866) | pal | 1919044..1919496 (-) | 453 | WP_006718991.1 | peptidoglycan-associated lipoprotein Pal | - |
| DQN58_RS09335 (NCTC10977_01867) | tolB | 1919511..1920791 (-) | 1281 | WP_006718992.1 | Tol-Pal system beta propeller repeat protein TolB | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 11601.44 Da Isoelectric Point: 10.5614
>NTDB_id=1141698 DQN58_RS09295 WP_006718982.1 1916150..1916452(-) (comQ) [Aggregatibacter segnis ATCC 33393 strain NCTC 10977]
MILSFPKINHKGMSLVSLLVTLSVFSGLFLTFNQWGNVQRKSAVEIYQRFQALQLAENQRQRQFLGLSCESSIHQNHIHF
HITCTQNQVTVKYPRGEIRL
MILSFPKINHKGMSLVSLLVTLSVFSGLFLTFNQWGNVQRKSAVEIYQRFQALQLAENQRQRQFLGLSCESSIHQNHIHF
HITCTQNQVTVKYPRGEIRL
Nucleotide
Download Length: 303 bp
>NTDB_id=1141698 DQN58_RS09295 WP_006718982.1 1916150..1916452(-) (comQ) [Aggregatibacter segnis ATCC 33393 strain NCTC 10977]
ATGATTTTGTCGTTCCCAAAAATTAATCACAAAGGCATGAGCTTGGTGTCCTTGTTGGTGACCTTATCTGTATTCAGCGG
GCTTTTCCTCACGTTTAACCAATGGGGAAATGTGCAACGCAAAAGTGCGGTGGAAATTTATCAACGTTTTCAAGCCCTCC
AACTTGCCGAAAATCAACGACAACGCCAGTTTCTTGGTCTCTCTTGCGAAAGCAGTATTCACCAAAATCACATTCATTTT
CATATTACGTGCACGCAAAATCAGGTTACGGTGAAATATCCTCGGGGTGAAATTCGTTTATAA
ATGATTTTGTCGTTCCCAAAAATTAATCACAAAGGCATGAGCTTGGTGTCCTTGTTGGTGACCTTATCTGTATTCAGCGG
GCTTTTCCTCACGTTTAACCAATGGGGAAATGTGCAACGCAAAAGTGCGGTGGAAATTTATCAACGTTTTCAAGCCCTCC
AACTTGCCGAAAATCAACGACAACGCCAGTTTCTTGGTCTCTCTTGCGAAAGCAGTATTCACCAAAATCACATTCATTTT
CATATTACGTGCACGCAAAATCAGGTTACGGTGAAATATCCTCGGGGTGAAATTCGTTTATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comQ | Haemophilus influenzae Rd KW20 |
56.122 |
98 |
0.55 |