Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   DQN35_RS02210 Genome accession   NZ_LS483442
Coordinates   414205..414930 (+) Length   241 a.a.
NCBI ID   WP_002983379.1    Uniprot ID   A0A4U7HHL6
Organism   Streptococcus pyogenes strain NCTC8370     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 409205..419930
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQN35_RS02180 (NCTC8370_00432) - 409393..410853 (+) 1461 WP_011285677.1 NCS2 family permease -
  DQN35_RS02185 (NCTC8370_00433) tsaE 411007..411468 (+) 462 WP_009880751.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  DQN35_RS02190 (NCTC8370_00434) - 411443..411967 (+) 525 WP_009880752.1 GNAT family N-acetyltransferase -
  DQN35_RS02195 (NCTC8370_00435) brpA 411976..413250 (+) 1275 WP_010922584.1 biofilm formation/cell division transcriptional regulator BrpA -
  DQN35_RS02200 (NCTC8370_00436) - 413361..413717 (-) 357 WP_002988657.1 hypothetical protein -
  DQN35_RS02205 (NCTC8370_00437) - 413714..414133 (-) 420 WP_002983376.1 HIT family protein -
  DQN35_RS02210 (NCTC8370_00438) pptA 414205..414930 (+) 726 WP_002983379.1 ABC transporter ATP-binding protein Regulator
  DQN35_RS02215 (NCTC8370_00439) - 414933..415967 (+) 1035 WP_010922583.1 ABC transporter permease -
  DQN35_RS02220 (NCTC8370_00440) ccrZ 416031..416822 (+) 792 WP_002983385.1 cell cycle regulator CcrZ -
  DQN35_RS02225 (NCTC8370_00441) trmB 416822..417457 (+) 636 WP_002983387.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  DQN35_RS02235 (NCTC8370_00443) rimP 417716..418252 (+) 537 WP_002988815.1 ribosome maturation factor RimP -
  DQN35_RS02240 (NCTC8370_00444) nusA 418427..419584 (+) 1158 WP_002988817.1 transcription termination factor NusA -
  DQN35_RS02245 (NCTC8370_00445) rnpM 419600..419896 (+) 297 WP_002983486.1 RNase P modulator RnpM -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26678.75 Da        Isoelectric Point: 4.5624

>NTDB_id=1141645 DQN35_RS02210 WP_002983379.1 414205..414930(+) (pptA) [Streptococcus pyogenes strain NCTC8370]
MLNIKNLTGGYHNIPVLNDVSFSVDNGELVGLIGLNGAGKSTTINEIIGFLKPYQGSISIDGLTLAENAVAYRQKIGFIP
ETPSLYEELTLSEHINTVAMAYDIDLEVAQKRAQPFLEMFRLTDKLEWFPVNFSKGMKQKVMIICAFVIDPSLFILDEPF
LGLDPLAISDLIQTLEVEKAKGKSILMSTHVLDSAERMCDRFVILHHGQVRAQGTLADLQEAFGDRSASLNDIYLALTKE
D

Nucleotide


Download         Length: 726 bp        

>NTDB_id=1141645 DQN35_RS02210 WP_002983379.1 414205..414930(+) (pptA) [Streptococcus pyogenes strain NCTC8370]
ATGTTAAACATTAAAAATCTAACAGGAGGATATCACAATATCCCTGTTTTAAACGATGTCTCATTTTCTGTAGACAATGG
AGAGTTAGTCGGTTTGATCGGGCTAAATGGTGCTGGAAAGTCAACAACTATCAACGAAATTATTGGCTTTTTGAAGCCTT
ATCAAGGAAGTATTTCTATTGATGGTTTAACTCTAGCAGAAAATGCAGTTGCCTACCGTCAAAAAATAGGTTTTATCCCA
GAAACTCCTAGTCTCTATGAAGAATTGACCTTATCAGAGCATATCAACACCGTAGCTATGGCTTATGATATCGACTTAGA
AGTGGCACAAAAACGAGCACAACCTTTCTTGGAAATGTTTCGTTTAACTGACAAACTTGAATGGTTTCCTGTCAATTTTT
CTAAAGGGATGAAACAAAAAGTCATGATTATTTGTGCCTTTGTCATTGATCCAAGTCTATTTATTCTTGATGAACCATTC
TTAGGGTTAGACCCTTTAGCTATTTCAGACTTAATCCAAACGCTAGAAGTCGAAAAAGCAAAAGGAAAATCTATTTTGAT
GAGTACACATGTTTTGGACTCTGCTGAAAGAATGTGTGATCGTTTTGTGATTTTGCATCATGGACAAGTTCGTGCCCAAG
GAACTCTTGCTGACTTGCAAGAAGCTTTTGGTGACCGTTCAGCGAGCTTAAATGATATCTATCTTGCATTAACAAAAGAG
GATTAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A4U7HHL6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

72.803

99.17

0.722
  pptA Streptococcus thermophilus LMD-9

71.967

99.17

0.714

Multiple sequence alignment