Detailed information NTG0114156

Bioinformatically predicted

Overview

• Name: comH
• Type: Machinery gene
• Locus tag: HPOKI112_RS07460
• Genome accession: NZ_CP006821
• Coordinates: 1551022..1552455 (-)
• Length: 477 a.a.
• NCBI ID: WP_025310055.1
• Uniprot ID: -
• Organism: Helicobacter pylori oki112
• Function: import of DNA into the periplasm (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1546022..1557455

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HPOKI112_RS07435 (HPOKI112_07730)	recG	1547147..1549018 (-)	1872	WP_025276468.1	ATP-dependent DNA helicase RecG	-
HPOKI112_RS07440 (HPOKI112_07735)	-	1549100..1549456 (+)	357	WP_025276469.1	hypothetical protein	-
HPOKI112_RS07445 (HPOKI112_07740)	-	1549460..1550095 (+)	636	WP_025277202.1	outer membrane protein	-
HPOKI112_RS07450 (HPOKI112_07745)	-	1550092..1550844 (-)	753	WP_025310054.1	exodeoxyribonuclease III	-
HPOKI112_RS07460 (HPOKI112_07755)	comH	1551022..1552455 (-)	1434	WP_025310055.1	hypothetical protein	Machinery gene
HPOKI112_RS07465 (HPOKI112_07760)	dnaA	1552676..1554043 (-)	1368	WP_015428410.1	chromosomal replication initiator protein DnaA	-
HPOKI112_RS07470 (HPOKI112_07765)	-	1554195..1554737 (+)	543	WP_025310056.1	purine-nucleoside phosphorylase	-
HPOKI112_RS07475 (HPOKI112_07770)	-	1554780..1555019 (+)	240	WP_000461832.1	DUF2443 domain-containing protein	-
HPOKI112_RS07480 (HPOKI112_07775)	glmS	1555020..1556813 (+)	1794	WP_015428412.1	glutamine--fructose-6-phosphate transaminase (isomerizing)	-

Sequence

Protein

• Length: 477 a.a.
• Molecular weight: 54641.45 Da
• Isoelectric Point: 6.6388

>NTDB_id=114156 HPOKI112_RS07460 WP_025310055.1 1551022..1552455(-) (comH) [Helicobacter pylori oki112]
MKKTLCLSFFLTFSNPLQALVIELLEEIKTSSHKGTFKAKVLDSKEPRQVLGVYNISPHKKLTLTITHISTAIVYQPLDE
KLSLETTLNPNRPTIPRNTQIVFSSKELKESHSHQMPSLNAPMQKPQNKPHSSQQPSQNFSYPESKLGSKNSKNSLLQPL
AIPSKISPTNETQTPTNDTKPPLKHSSEDQENNLFIAPPTEKTLPNNNADINEHHESNENKDNVEKQATRDPNIKEFACG
KWVYDDENLQAYRPSILKRVDEDKQTATDITPCDYSTAENKSGKIITPYTKISVHKTEPLEEPQTFEAKNNFAILQARSS
TEKCKRARARKDGTTRQCYLIEEPLKQAWESEYEITTQLVKAIYERPKQDDQVEPTFYETSELAYSSTRKSEITQNELNL
NEKFMEFVEVYEGHYLNDIVKESSEYKEWVKNHVRFKEGVCMVLEIEEQPQAKSTPLSIENSRVVCVKKGNYLFNEV

Nucleotide

• Length: 1434 bp

>NTDB_id=114156 HPOKI112_RS07460 WP_025310055.1 1551022..1552455(-) (comH) [Helicobacter pylori oki112]
ATGAAAAAAACCCTTTGTCTGTCTTTCTTTCTGACTTTCTCTAACCCTCTTCAAGCCCTTGTGATCGAGCTTTTAGAAGA
AATCAAAACTTCGTCGCATAAAGGCACTTTTAAGGCTAAAGTCCTTGATTCTAAAGAACCAAGACAAGTTTTAGGCGTTT
ATAATATCTCCCCACACAAAAAACTCACGCTCACTATCACCCACATATCCACTGCAATTGTTTATCAACCCCTTGATGAA
AAACTTTCTTTAGAAACGACCTTAAACCCTAACCGCCCTACTATTCCCAGAAACACCCAAATTGTTTTTTCTTCAAAAGA
ATTGAAAGAGTCGCACTCGCACCAAATGCCTTCTTTAAACGCACCCATGCAAAAACCACAAAACAAGCCCCATTCATCGC
AACAACCTTCTCAAAACTTTTCTTACCCAGAGTCCAAACTAGGCTCTAAAAACTCTAAAAACAGCCTTTTGCAGCCTTTA
GCAATTCCTAGCAAAATAAGTCCCACTAACGAAACTCAAACGCCAACAAACGACACTAAACCCCCTTTAAAGCATTCTTC
AGAAGATCAAGAAAACAACCTCTTTATAGCACCACCCACTGAAAAAACGCTCCCTAACAACAACGCTGATATTAATGAAC
ACCATGAAAGCAATGAAAATAAGGATAATGTGGAAAAACAAGCCACTAGAGATCCTAATATTAAAGAATTTGCGTGCGGG
AAGTGGGTCTATGACGATGAAAACTTGCAAGCCTATCGCCCAAGCATTTTAAAACGCGTTGATGAAGACAAACAGACTGC
GACAGATATTACCCCTTGCGATTACAGCACCGCTGAAAATAAAAGCGGTAAAATCATTACCCCCTATACTAAAATCTCCG
TTCATAAAACAGAGCCTTTAGAAGAGCCACAAACTTTTGAAGCTAAAAACAATTTCGCCATTCTTCAAGCCAGAAGCTCT
ACAGAAAAATGCAAAAGGGCTAGAGCAAGAAAAGACGGCACAACTAGGCAATGCTATCTGATAGAAGAGCCTTTAAAACA
AGCATGGGAGAGTGAGTATGAAATCACCACGCAATTAGTGAAAGCCATTTATGAGCGCCCTAAACAAGACGACCAAGTAG
AGCCAACTTTTTATGAAACCAGCGAATTGGCTTATTCTTCCACACGAAAAAGCGAAATAACGCAAAATGAATTGAATTTG
AATGAAAAATTCATGGAATTTGTGGAAGTGTATGAGGGGCATTATTTAAACGATATAGTCAAAGAGAGCAGTGAATATAA
AGAATGGGTTAAAAACCATGTGCGCTTTAAAGAAGGGGTGTGCATGGTTTTAGAAATAGAAGAACAACCACAAGCTAAAA
GCACGCCTTTGAGCATTGAAAACTCTCGTGTGGTGTGTGTCAAAAAGGGAAATTATTTATTCAACGAAGTTTGA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comH	Helicobacter pylori 26695	96.242	100	0.966