Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   DQN29_RS09385 Genome accession   NZ_LS483437
Coordinates   1808130..1808843 (+) Length   237 a.a.
NCBI ID   WP_002982243.1    Uniprot ID   A0A9X5LXW4
Organism   Streptococcus pyogenes strain NCTC13751     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1803130..1813843
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQN29_RS09375 (NCTC13751_01870) treC 1804199..1805827 (-) 1629 WP_076639522.1 alpha,alpha-phosphotrehalase -
  DQN29_RS09380 (NCTC13751_01871) treP 1805895..1807919 (-) 2025 WP_076639523.1 PTS system trehalose-specific EIIBC component -
  DQN29_RS09385 (NCTC13751_01872) treR 1808130..1808843 (+) 714 WP_002982243.1 trehalose operon repressor Regulator
  DQN29_RS09395 (NCTC13751_01873) - 1809122..1809460 (-) 339 Protein_1759 winged helix-turn-helix transcriptional regulator -
  DQN29_RS09400 (NCTC13751_01874) - 1809646..1810503 (+) 858 WP_076639524.1 VOC family protein -
  DQN29_RS09405 (NCTC13751_01875) yaaA 1810545..1811276 (+) 732 WP_002982222.1 peroxide stress protein YaaA -
  DQN29_RS09410 (NCTC13751_01876) nrdG 1811450..1812064 (-) 615 WP_002982219.1 anaerobic ribonucleoside-triphosphate reductase activating protein -
  DQN29_RS09415 (NCTC13751_01877) - 1812064..1812573 (-) 510 WP_002991345.1 GNAT family N-acetyltransferase -
  DQN29_RS09420 (NCTC13751_01878) - 1812582..1813517 (-) 936 WP_076639525.1 Gfo/Idh/MocA family protein -
  DQN29_RS09960 (NCTC13751_01879) - 1813546..1813692 (-) 147 WP_002982210.1 hypothetical protein -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27592.78 Da        Isoelectric Point: 9.6226

>NTDB_id=1141531 DQN29_RS09385 WP_002982243.1 1808130..1808843(+) (treR) [Streptococcus pyogenes strain NCTC13751]
MTKYERIYKDLETKINKDFYKEGDFLPTEIELSQQYQASRDTVRKALSLLTKAGLILKKQGRGTQVIKHHQIMFPISELT
SYQELVSYSNLDSKTNVIAIDKLIVDETLSKLTGFSKNSLVWRVTRQRVVEGVASVLDIDYLSKTLVPIMTREIAEHSIY
QYLEKELHLAIDFALKEVTIDQITDRDKILLDLGSDQHVVSVKSKVYLSNNNQFQFTESRHKLEKFKFLDFARRRPK

Nucleotide


Download         Length: 714 bp        

>NTDB_id=1141531 DQN29_RS09385 WP_002982243.1 1808130..1808843(+) (treR) [Streptococcus pyogenes strain NCTC13751]
ATGACAAAGTATGAACGTATTTATAAAGACCTCGAAACAAAAATAAACAAAGACTTCTACAAAGAAGGGGATTTTTTACC
TACTGAAATAGAATTGAGTCAACAATACCAAGCTAGCCGAGATACCGTCCGCAAGGCTCTCTCGCTTCTCACTAAGGCAG
GCCTTATCCTCAAAAAACAAGGACGTGGCACCCAAGTGATTAAGCATCATCAGATCATGTTCCCCATCTCAGAACTAACT
AGCTATCAGGAACTCGTCTCTTACTCAAATCTAGATTCTAAGACCAACGTCATTGCCATTGATAAACTGATTGTGGATGA
GACACTTTCAAAATTGACCGGTTTTAGCAAAAACAGCTTGGTCTGGCGTGTTACACGCCAACGCGTTGTTGAGGGTGTGG
CTTCCGTCTTAGACATTGATTACCTTAGTAAAACTTTGGTGCCAATAATGACAAGGGAAATCGCAGAGCATTCTATTTAT
CAATATTTGGAAAAGGAACTCCATCTCGCCATTGACTTTGCCCTCAAAGAGGTTACCATTGACCAAATAACCGATCGTGA
TAAAATTTTACTTGACCTTGGATCAGACCAACATGTTGTTTCCGTCAAATCCAAAGTCTACCTTTCCAATAATAACCAAT
TCCAATTCACCGAGAGTCGCCATAAACTGGAAAAATTTAAATTTTTAGATTTTGCTCGGCGCAGACCAAAATAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, gntR family (GntR)

(3-66)

UTRA domain (UTRA)

(91-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

68.803

98.734

0.679

Multiple sequence alignment