Detailed information    

insolico Bioinformatically predicted

Overview


Name   pptA   Type   Regulator
Locus tag   DQN29_RS07825 Genome accession   NZ_LS483437
Coordinates   1476219..1476944 (-) Length   241 a.a.
NCBI ID   WP_002983379.1    Uniprot ID   A0A4U7HHL6
Organism   Streptococcus pyogenes strain NCTC13751     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1471219..1481944
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQN29_RS07790 (NCTC13751_01565) rnpM 1471253..1471549 (-) 297 WP_002983486.1 RNase P modulator RnpM -
  DQN29_RS07795 (NCTC13751_01566) nusA 1471565..1472722 (-) 1158 WP_002988817.1 transcription termination factor NusA -
  DQN29_RS07800 (NCTC13751_01567) rimP 1472897..1473433 (-) 537 WP_002988815.1 ribosome maturation factor RimP -
  DQN29_RS07810 (NCTC13751_01569) trmB 1473692..1474327 (-) 636 WP_002983387.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  DQN29_RS07815 (NCTC13751_01570) ccrZ 1474327..1475118 (-) 792 WP_002983385.1 cell cycle regulator CcrZ -
  DQN29_RS07820 (NCTC13751_01571) - 1475182..1476216 (-) 1035 WP_023610531.1 ABC transporter permease -
  DQN29_RS07825 (NCTC13751_01572) pptA 1476219..1476944 (-) 726 WP_002983379.1 ABC transporter ATP-binding protein Regulator
  DQN29_RS07830 (NCTC13751_01573) - 1477016..1477435 (+) 420 WP_011285081.1 HIT family protein -
  DQN29_RS07835 (NCTC13751_01574) - 1477432..1477788 (+) 357 WP_020905404.1 hypothetical protein -
  DQN29_RS07840 (NCTC13751_01575) brpA 1477899..1479173 (-) 1275 WP_020837594.1 biofilm formation/cell division transcriptional regulator BrpA -
  DQN29_RS07845 (NCTC13751_01576) - 1479182..1479706 (-) 525 WP_030126880.1 GNAT family N-acetyltransferase -
  DQN29_RS07850 (NCTC13751_01577) tsaE 1479681..1480142 (-) 462 WP_002988647.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  DQN29_RS07855 (NCTC13751_01578) - 1480296..1481756 (-) 1461 WP_023609915.1 NCS2 family permease -

Sequence


Protein


Download         Length: 241 a.a.        Molecular weight: 26678.75 Da        Isoelectric Point: 4.5624

>NTDB_id=1141525 DQN29_RS07825 WP_002983379.1 1476219..1476944(-) (pptA) [Streptococcus pyogenes strain NCTC13751]
MLNIKNLTGGYHNIPVLNDVSFSVDNGELVGLIGLNGAGKSTTINEIIGFLKPYQGSISIDGLTLAENAVAYRQKIGFIP
ETPSLYEELTLSEHINTVAMAYDIDLEVAQKRAQPFLEMFRLTDKLEWFPVNFSKGMKQKVMIICAFVIDPSLFILDEPF
LGLDPLAISDLIQTLEVEKAKGKSILMSTHVLDSAERMCDRFVILHHGQVRAQGTLADLQEAFGDRSASLNDIYLALTKE
D

Nucleotide


Download         Length: 726 bp        

>NTDB_id=1141525 DQN29_RS07825 WP_002983379.1 1476219..1476944(-) (pptA) [Streptococcus pyogenes strain NCTC13751]
ATGTTAAACATTAAAAATCTAACAGGAGGATATCACAATATCCCTGTTTTAAACGATGTCTCATTTTCTGTAGACAATGG
AGAGTTAGTCGGTTTGATCGGGCTAAATGGTGCTGGAAAGTCAACAACTATCAACGAAATTATTGGCTTTTTGAAGCCTT
ATCAAGGAAGTATTTCTATTGATGGTTTAACTCTAGCAGAAAATGCAGTTGCCTACCGTCAAAAAATAGGTTTTATCCCA
GAAACTCCTAGTCTCTATGAAGAATTGACCTTATCAGAGCATATCAACACCGTAGCTATGGCTTATGATATCGACTTAGA
AGTGGCACAAAAACGAGCACAACCTTTCTTGGAAATGTTTCGTTTAACTGACAAACTTGAATGGTTTCCTGTCAATTTTT
CTAAAGGGATGAAACAAAAAGTCATGATTATTTGTGCCTTTGTCATTGATCCAAGTCTATTTATTCTTGATGAACCATTC
TTAGGGTTAGACCCTTTAGCTATTTCAGACTTAATCCAAACGCTAGAAGTCGAAAAAGCAAAAGGAAAATCTATTTTGAT
GAGTACACATGTTTTGGACTCTGCTGAAAGAATGTGTGATCGCTTTGTGATTTTGCATCATGGACAAGTTCGTGCCCAAG
GAACTCTTGCTGACTTGCAAGAAGCTTTTGGTGACCGTTCAGCGAGCTTAAATGATATCTATCTTGCATTAACAAAAGAG
GATTAA

Domains


Predicted by InterproScan.

(17-160)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A4U7HHL6

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

72.803

99.17

0.722

  pptA Streptococcus thermophilus LMD-9

71.967

99.17

0.714


Multiple sequence alignment