Detailed information NTG1141408

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: DQN79_RS09320
• Genome accession: NZ_LS483435
• Coordinates: 1834028..1836283 (+)
• Length: 751 a.a.
• NCBI ID: WP_041961427.1
• Uniprot ID: -
• Organism: Neisseria elongata subsp. glycolytica strain NCTC11050
• Function: DNA processing; DNA transport into the cytoplasm (predicted from homology) DNA processing DNA binding and uptake

Genomic Context

Location: 1829028..1841283

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DQN79_RS09285 (NCTC11050_01783)	-	1829200..1829439 (+)	240	WP_003771360.1	DUF333 domain-containing protein	-
DQN79_RS09290 (NCTC11050_01784)	-	1829509..1829946 (-)	438	WP_003771357.1	META domain-containing protein	-
DQN79_RS09295 (NCTC11050_01785)	-	1830029..1830367 (-)	339	WP_003771355.1	DUF4298 domain-containing protein	-
DQN79_RS09300 (NCTC11050_01786)	ruvB	1830538..1831569 (+)	1032	WP_003771353.1	Holliday junction branch migration DNA helicase RuvB	-
DQN79_RS09305 (NCTC11050_01787)	-	1831596..1832258 (+)	663	WP_003771348.1	hypothetical protein	-
DQN79_RS09310 (NCTC11050_01788)	prfA	1832352..1833428 (+)	1077	WP_003771346.1	peptide chain release factor 1	-
DQN79_RS09315 (NCTC11050_01789)	-	1833536..1833934 (+)	399	WP_003771344.1	hypothetical protein	-
DQN79_RS09320 (NCTC11050_01790)	comA	1834028..1836283 (+)	2256	WP_041961427.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
DQN79_RS09325 (NCTC11050_01791)	-	1836371..1837183 (-)	813	WP_003771547.1	sulfite exporter TauE/SafE family protein	-
DQN79_RS09330 (NCTC11050_01792)	grxD	1837323..1837631 (-)	309	WP_040665786.1	Grx4 family monothiol glutaredoxin	-
DQN79_RS09335 (NCTC11050_01793)	-	1837772..1839691 (+)	1920	WP_003771552.1	ABC-F family ATP-binding cassette domain-containing protein	-
DQN79_RS09340 (NCTC11050_01794)	-	1839696..1840205 (+)	510	WP_003771555.1	hypothetical protein	-
DQN79_RS12250 (NCTC11050_01795)	-	1840314..1840592 (-)	279	WP_227717120.1	hypothetical protein	-

Sequence

Protein

• Length: 751 a.a.
• Molecular weight: 81307.04 Da
• Isoelectric Point: 10.0946

>NTDB_id=1141408 DQN79_RS09320 WP_041961427.1 1834028..1836283(+) (comA) [Neisseria elongata subsp. glycolytica strain NCTC11050]
MPIYLPSAFCAGVLLSFALPAAPPFWLFAVWAACAVPILRRFPRTAVFVLLTCAGTAYGVWRTEQALVARWPLERQGEAV
EMTVRAAGLAQDDGRRVRLEAEAETSGGRRYRVQLSDYQRREWPAGSVWRLKLKMRPPIGEENIGGFSREAWALANGIDA
SATAGAERQLLADRKNGFSDGLLRLRGRIRSSWQRLPPEMADGAALMRALSIGEQDALSGGWWQVFRPLGLNHLISVSGL
HVGMVALLAAWLMKRLLLLLPAAPRRPRVWMLAAGAAAALVYSGLAGFAVPTLRSMLMIASVAAAWSLGGTASAWRGWWA
ALALILLLDPSAALAAGSWLSFGLVAALLWADSCRTGGGKAWWISALRGQWAATLASLPAVGFLFSALPPASPLANAAAI
PWFSWLLVPLALTASFFPFYPLQYAAAWLGQHTLHVLAAMAEFAPEWGLAAAPWPLLLSALAAVAVWLLPRGAALRPWAA
VVLAGFLLYRPAPPKEGRLKMVVLDVGQGLAVYFQTASHHLLFDTGTAGAAQMQTLPALHAHGVRRLDTLLLSHHDTDHD
GGAPLIIRALKPREVLAGQPEFYGGLGPTQVQNCRTGRQWEWDGVHFELLAVEGEAADDNARSCVLRAVAGGTAFIVTGD
LDIKGERKLLERYGQSLYSQALVLGHHGSSGSSSGAFLNAVSPDFAIASSGFGNSYRHPTAEVQNRVRAHGIRLLRTDHQ
GAWLLESDGQTVTARQWRPKRFYWQWKPLDD

Nucleotide

• Length: 2256 bp

>NTDB_id=1141408 DQN79_RS09320 WP_041961427.1 1834028..1836283(+) (comA) [Neisseria elongata subsp. glycolytica strain NCTC11050]
ATGCCGATTTATCTGCCGTCCGCCTTTTGTGCGGGCGTTTTGCTATCGTTCGCCCTGCCTGCCGCACCGCCGTTTTGGCT
GTTTGCGGTATGGGCGGCGTGTGCCGTGCCGATACTGCGCCGTTTTCCGCGCACGGCGGTTTTCGTGCTGCTGACGTGCG
CGGGGACGGCATACGGCGTATGGCGGACGGAACAGGCTTTGGTCGCCCGCTGGCCTTTGGAACGGCAGGGCGAGGCGGTA
GAAATGACGGTGAGGGCGGCCGGTTTGGCGCAGGACGACGGGCGGCGGGTGCGCTTGGAAGCCGAAGCGGAAACGTCCGG
CGGGCGGCGTTACCGCGTGCAGTTGTCCGACTATCAACGGCGCGAATGGCCGGCCGGCAGCGTGTGGCGGCTGAAGCTGA
AAATGCGCCCGCCTATCGGTGAAGAAAACATCGGTGGTTTCAGCCGCGAGGCATGGGCTTTGGCCAACGGCATAGACGCA
TCGGCCACGGCCGGGGCGGAACGGCAGCTGCTGGCCGACAGGAAAAACGGTTTTTCAGACGGCCTCCTGCGCCTGCGCGG
ACGCATCCGCTCAAGCTGGCAGCGGCTGCCGCCCGAAATGGCCGACGGCGCGGCCTTGATGCGCGCGCTCTCCATCGGCG
AGCAGGACGCGCTGTCAGGCGGCTGGTGGCAGGTGTTCCGCCCGTTGGGCCTGAACCATTTGATCAGCGTGTCCGGCCTG
CATGTCGGCATGGTGGCCCTGCTGGCCGCCTGGCTGATGAAACGCCTGCTGCTCCTTTTGCCCGCCGCGCCGAGGCGGCC
GCGCGTTTGGATGCTGGCGGCGGGTGCGGCGGCGGCCTTGGTTTACAGCGGCTTGGCCGGATTTGCCGTCCCCACCCTGC
GCTCGATGCTGATGATTGCCTCCGTTGCGGCAGCCTGGAGTCTGGGCGGCACGGCTTCGGCCTGGCGCGGCTGGTGGGCG
GCGCTGGCCCTGATTTTGCTGCTCGACCCGTCGGCCGCATTGGCGGCAGGCAGCTGGCTGTCGTTCGGACTGGTGGCCGC
GCTCTTGTGGGCGGACTCCTGCCGCACGGGCGGCGGCAAGGCATGGTGGATTTCGGCCTTGCGCGGGCAATGGGCGGCCA
CGTTGGCCTCCCTCCCGGCGGTGGGTTTTCTATTTTCCGCCCTGCCGCCCGCCAGCCCGTTGGCCAATGCCGCGGCGATT
CCGTGGTTTTCCTGGCTGCTGGTACCGCTGGCACTGACGGCCTCGTTCTTTCCGTTCTACCCCCTGCAATACGCGGCGGC
CTGGCTGGGGCAGCATACTTTGCACGTTTTGGCCGCGATGGCGGAATTCGCGCCGGAATGGGGTTTGGCCGCCGCACCGT
GGCCGCTGCTGCTGTCGGCACTGGCGGCGGTGGCCGTTTGGCTGCTGCCGCGCGGTGCGGCATTGCGCCCGTGGGCGGCC
GTCGTTTTGGCCGGTTTCCTGTTATACCGCCCCGCCCCGCCAAAGGAAGGCCGTCTGAAAATGGTTGTGCTGGATGTCGG
ACAAGGCTTGGCGGTGTATTTTCAGACGGCCTCCCATCATCTGCTGTTCGATACCGGCACGGCGGGCGCGGCGCAGATGC
AGACCCTCCCCGCCCTGCACGCACACGGCGTGCGCCGCCTCGACACCCTGCTGCTGTCCCACCACGATACCGACCACGAC
GGCGGCGCACCGCTGATTATCCGTGCACTCAAGCCGCGCGAGGTGCTGGCCGGACAGCCCGAATTTTACGGCGGCTTAGG
CCCGACTCAGGTGCAAAACTGCCGCACCGGCCGGCAATGGGAATGGGACGGCGTGCATTTCGAACTCCTCGCCGTCGAAG
GCGAAGCCGCAGACGATAACGCCCGAAGCTGCGTCCTGCGCGCCGTGGCGGGCGGCACGGCGTTTATCGTAACAGGCGAC
CTCGACATCAAAGGAGAACGAAAACTGCTGGAACGCTACGGCCAAAGCCTGTACAGCCAAGCCTTGGTGTTGGGGCACCA
CGGCAGCAGCGGCTCGTCGTCGGGCGCATTCCTCAACGCCGTCTCCCCCGACTTCGCCATCGCCTCCAGCGGCTTCGGCA
ACAGCTACCGCCATCCGACCGCCGAAGTGCAAAACCGCGTCCGCGCACACGGCATCCGCCTGCTCCGCACCGACCACCAA
GGCGCGTGGCTGCTCGAATCCGACGGCCAAACCGTTACCGCGCGCCAGTGGCGGCCGAAACGGTTTTACTGGCAATGGAA
ACCGCTGGACGATTAA

Domains

Predicted by InterProScan.

• Competence protein (Competence) (210-470)

• Metallo-beta-lactamase superfamily (Lactamase_B) (505-585)

• Domain of unknown function (DUF4131) (DUF4131) (24-167)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Neisseria gonorrhoeae MS11	53.191	100	0.533