Detailed information NTG0114136

Bioinformatically predicted

Overview

• Name: comH
• Type: Machinery gene
• Locus tag: HPOKI102_RS07425
• Genome accession: NZ_CP006820
• Coordinates: 1545896..1547335 (-)
• Length: 479 a.a.
• NCBI ID: WP_015428409.1
• Uniprot ID: -
• Organism: Helicobacter pylori oki102
• Function: import of DNA into the periplasm (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1540896..1552335

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HPOKI102_RS07400 (HPOKI102_07710)	recG	1542021..1543892 (-)	1872	WP_025276468.1	ATP-dependent DNA helicase RecG	-
HPOKI102_RS07405 (HPOKI102_07715)	-	1543974..1544330 (+)	357	WP_025276469.1	hypothetical protein	-
HPOKI102_RS07410 (HPOKI102_07720)	-	1544334..1544969 (+)	636	WP_025276470.1	outer membrane protein	-
HPOKI102_RS07415 (HPOKI102_07725)	-	1544966..1545718 (-)	753	WP_025276471.1	exodeoxyribonuclease III	-
HPOKI102_RS07425 (HPOKI102_07735)	comH	1545896..1547335 (-)	1440	WP_015428409.1	hypothetical protein	Machinery gene
HPOKI102_RS07435 (HPOKI102_07740)	dnaA	1547564..1548931 (-)	1368	WP_015428410.1	chromosomal replication initiator protein DnaA	-
HPOKI102_RS07440 (HPOKI102_07745)	-	1549083..1549625 (+)	543	WP_025276472.1	purine-nucleoside phosphorylase	-
HPOKI102_RS07445 (HPOKI102_07750)	-	1549668..1549907 (+)	240	WP_000461832.1	DUF2443 domain-containing protein	-
HPOKI102_RS07450 (HPOKI102_07755)	glmS	1549908..1551701 (+)	1794	WP_015428412.1	glutamine--fructose-6-phosphate transaminase (isomerizing)	-

Sequence

Protein

• Length: 479 a.a.
• Molecular weight: 54832.72 Da
• Isoelectric Point: 6.6633

>NTDB_id=114136 HPOKI102_RS07425 WP_015428409.1 1545896..1547335(-) (comH) [Helicobacter pylori oki102]
MKKSLCLSFFLTFSNPLQALVIELLEEIKTSPHKGTFKAKVLDSKEPRQVLGVYNISPHKKLTLTITHISTAIVYQPLDE
KLSLETTLNPNRPTIPRNTQIVFSSKELKESHSHQMPSLNAPMQKPQNKPHSSQQPSQNFSYPESKLGSKNSKNSLLQPL
AIPSKISPTNETQTPTNDTKPPLKHSSEDQENNLFIAPPTEKTLPNNIPNTDISENNESNENKDNVEKQATRDPNIKEFA
CGKWVYDDENLQAYRPSILKRVDEDKQTATDITPCDYSTAENKSGKIITPYTKISVHKTEPLEEPQTFEAKNNFAILQAR
SSTEKCKRARARKDGTTRQCYLIEEPLKQAWESEYEITTQLVKAIYERPKQDDQVEPTFYETSELAYSSTRKSEITQNEL
NLNEKFMEFVEVYEGHYLNDIVKESSEYKEWVKNHVRFKEGVCMVLEIEEQPRAKSTPLSIENSRVVCVKKGNYLFNEV

Nucleotide

• Length: 1440 bp

>NTDB_id=114136 HPOKI102_RS07425 WP_015428409.1 1545896..1547335(-) (comH) [Helicobacter pylori oki102]
ATGAAAAAATCCCTTTGTCTGTCTTTCTTTCTGACTTTCTCTAACCCTCTTCAAGCCCTTGTGATCGAGCTTTTAGAAGA
GATCAAAACTTCGCCGCATAAAGGCACTTTTAAGGCTAAAGTCCTTGATTCTAAAGAACCAAGACAAGTTTTAGGCGTTT
ATAATATCTCCCCACACAAAAAACTCACGCTCACTATCACCCACATATCCACTGCAATTGTTTATCAACCCCTTGATGAA
AAACTTTCTTTAGAAACGACCTTAAACCCTAACCGCCCTACTATTCCCAGAAACACCCAAATTGTTTTTTCTTCAAAAGA
ATTGAAAGAGTCGCACTCGCACCAAATGCCTTCTTTAAACGCACCCATGCAAAAACCACAAAACAAGCCCCATTCATCGC
AACAACCTTCTCAAAACTTTTCTTACCCAGAGTCCAAACTAGGCTCTAAAAACTCTAAAAACAGCCTTTTGCAGCCTTTA
GCAATTCCTAGCAAAATAAGTCCCACTAACGAAACTCAAACGCCAACAAACGACACTAAACCCCCCTTAAAGCATTCTTC
AGAAGATCAAGAAAACAACCTCTTTATAGCGCCACCCACTGAAAAAACGCTCCCTAATAACATCCCTAACACTGATATTA
GTGAAAACAATGAAAGCAATGAAAATAAGGATAATGTGGAAAAACAAGCCACTAGAGATCCTAATATTAAAGAATTTGCG
TGCGGGAAGTGGGTCTATGACGATGAAAACTTGCAAGCCTATCGCCCAAGCATTTTAAAACGCGTTGATGAAGACAAACA
GACTGCGACAGATATTACCCCTTGCGATTACAGCACCGCTGAAAATAAAAGCGGTAAAATCATTACCCCCTATACTAAAA
TCTCCGTTCATAAAACAGAGCCTTTAGAAGAGCCACAAACTTTTGAAGCTAAAAACAATTTCGCCATTCTTCAAGCCAGA
AGCTCTACAGAAAAATGCAAAAGGGCTAGAGCAAGAAAAGACGGCACAACTAGGCAATGCTATCTGATAGAAGAGCCTTT
AAAACAAGCATGGGAGAGTGAGTATGAAATCACCACGCAATTAGTGAAAGCCATTTATGAGCGCCCTAAACAAGACGACC
AAGTAGAGCCAACTTTTTATGAAACCAGCGAATTGGCTTATTCTTCCACACGAAAAAGCGAAATAACGCAAAATGAATTG
AATTTGAATGAAAAATTCATGGAATTTGTGGAAGTGTATGAGGGGCATTATTTAAACGATATAGTCAAAGAGAGCAGTGA
ATATAAAGAATGGGTTAAAAACCATGTGCGCTTTAAAGAAGGGGTGTGCATGGTTTTAGAAATAGAAGAACAACCACGAG
CTAAAAGCACGCCTTTGAGCATTGAAAACTCTCGTGTGGTGTGTGTCAAAAAGGGGAATTATTTATTCAACGAAGTTTGA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comH	Helicobacter pylori 26695	97.286	100	0.973