Detailed information    

insolico Bioinformatically predicted

Overview


Name   pptA   Type   Regulator
Locus tag   DQN32_RS07450 Genome accession   NZ_LS483432
Coordinates   1424293..1425018 (-) Length   241 a.a.
NCBI ID   WP_002983379.1    Uniprot ID   A0A4U7HHL6
Organism   Streptococcus pyogenes strain NCTC13745     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1419293..1430018
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQN32_RS07415 (NCTC13745_01474) rnpM 1419327..1419623 (-) 297 WP_002983486.1 RNase P modulator RnpM -
  DQN32_RS07420 (NCTC13745_01475) nusA 1419639..1420796 (-) 1158 WP_002983485.1 transcription termination factor NusA -
  DQN32_RS07425 (NCTC13745_01476) rimP 1420971..1421507 (-) 537 WP_002988815.1 ribosome maturation factor RimP -
  DQN32_RS07435 (NCTC13745_01478) trmB 1421766..1422401 (-) 636 WP_031488472.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  DQN32_RS07440 (NCTC13745_01479) ccrZ 1422401..1423192 (-) 792 WP_002983385.1 cell cycle regulator CcrZ -
  DQN32_RS07445 (NCTC13745_01480) - 1423256..1424290 (-) 1035 WP_031577431.1 ABC transporter permease -
  DQN32_RS07450 (NCTC13745_01481) pptA 1424293..1425018 (-) 726 WP_002983379.1 ABC transporter ATP-binding protein Regulator
  DQN32_RS07455 (NCTC13745_01482) - 1425090..1425509 (+) 420 WP_002983376.1 HIT family protein -
  DQN32_RS07460 (NCTC13745_01483) - 1425506..1425862 (+) 357 WP_031488470.1 hypothetical protein -
  DQN32_RS07465 (NCTC13745_01484) brpA 1425973..1427256 (-) 1284 WP_111681976.1 biofilm formation/cell division transcriptional regulator BrpA -
  DQN32_RS07470 (NCTC13745_01485) - 1427265..1427789 (-) 525 WP_031488468.1 GNAT family N-acetyltransferase -
  DQN32_RS07475 (NCTC13745_01486) tsaE 1427764..1428225 (-) 462 WP_009880751.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  DQN32_RS07480 (NCTC13745_01487) - 1428379..1429839 (-) 1461 WP_031488467.1 NCS2 family permease -

Sequence


Protein


Download         Length: 241 a.a.        Molecular weight: 26678.75 Da        Isoelectric Point: 4.5624

>NTDB_id=1141347 DQN32_RS07450 WP_002983379.1 1424293..1425018(-) (pptA) [Streptococcus pyogenes strain NCTC13745]
MLNIKNLTGGYHNIPVLNDVSFSVDNGELVGLIGLNGAGKSTTINEIIGFLKPYQGSISIDGLTLAENAVAYRQKIGFIP
ETPSLYEELTLSEHINTVAMAYDIDLEVAQKRAQPFLEMFRLTDKLEWFPVNFSKGMKQKVMIICAFVIDPSLFILDEPF
LGLDPLAISDLIQTLEVEKAKGKSILMSTHVLDSAERMCDRFVILHHGQVRAQGTLADLQEAFGDRSASLNDIYLALTKE
D

Nucleotide


Download         Length: 726 bp        

>NTDB_id=1141347 DQN32_RS07450 WP_002983379.1 1424293..1425018(-) (pptA) [Streptococcus pyogenes strain NCTC13745]
ATGTTAAACATTAAAAATCTAACAGGAGGATATCACAATATCCCTGTTTTAAACGATGTCTCATTTTCTGTAGACAATGG
AGAGTTAGTCGGTTTGATCGGGCTAAATGGTGCTGGAAAGTCAACAACTATCAACGAAATTATTGGCTTTTTGAAGCCTT
ATCAAGGAAGTATTTCTATTGATGGTTTAACTCTAGCAGAAAATGCAGTTGCCTACCGTCAAAAAATAGGTTTTATCCCA
GAAACTCCTAGTCTCTATGAAGAATTGACCTTATCAGAGCATATCAACACCGTAGCTATGGCTTATGATATCGACTTAGA
AGTGGCACAAAAACGAGCACAACCTTTCTTGGAAATGTTTCGTTTAACTGACAAACTTGAATGGTTTCCTGTCAATTTTT
CTAAAGGGATGAAACAAAAAGTCATGATTATTTGTGCCTTTGTCATTGATCCAAGTCTATTTATTCTTGATGAACCATTC
TTAGGGTTAGACCCTTTAGCTATTTCAGACTTAATCCAAACGCTAGAAGTCGAAAAAGCAAAAGGAAAATCTATTTTGAT
GAGTACACATGTTTTGGACTCTGCTGAAAGAATGTGTGATCGCTTTGTGATTTTGCATCATGGACAAGTTCGTGCCCAAG
GAACTCTTGCTGACTTGCAAGAAGCTTTTGGTGACCGTTCAGCGAGCTTAAATGATATCTATCTTGCATTAACAAAAGAG
GATTAA

Domains


Predicted by InterproScan.

(17-160)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A4U7HHL6

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

72.803

99.17

0.722

  pptA Streptococcus thermophilus LMD-9

71.967

99.17

0.714


Multiple sequence alignment