Detailed information    

insolico Bioinformatically predicted

Overview


Name   HI0659   Type   Machinery gene
Locus tag   DQN49_RS02155 Genome accession   NZ_LS483429
Coordinates   401397..401693 (+) Length   98 a.a.
NCBI ID   WP_005650837.1    Uniprot ID   Q4QMQ7
Organism   Haemophilus aegyptius strain NCTC8502     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 396397..406693
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQN49_RS10630 (NCTC8502_00436) - 397696..397923 (+) 228 WP_192876922.1 PT domain-containing protein -
  DQN49_RS02145 (NCTC8502_00437) - 398043..400784 (+) 2742 WP_408609792.1 TonB-dependent hemoglobin/transferrin/lactoferrin family receptor -
  DQN49_RS02150 (NCTC8502_00438) - 401045..401404 (+) 360 WP_005694481.1 type II toxin-antitoxin system RelE/ParE family toxin -
  DQN49_RS02155 (NCTC8502_00439) HI0659 401397..401693 (+) 297 WP_005650837.1 helix-turn-helix domain-containing protein Machinery gene
  DQN49_RS02160 (NCTC8502_00440) - 401854..403770 (+) 1917 WP_006995317.1 ABC transporter ATP-binding protein -
  DQN49_RS02165 (NCTC8502_00441) - 403780..404316 (+) 537 WP_006995316.1 topoisomerase DNA-binding C4 zinc finger domain-containing protein -
  DQN49_RS02170 (NCTC8502_00442) - 404332..404883 (+) 552 WP_006995315.1 Sua5/YciO/YrdC/YwlC family protein -
  DQN49_RS02175 (NCTC8502_00443) aroE 404887..405693 (+) 807 WP_006995314.1 shikimate dehydrogenase -
  DQN49_RS02180 (NCTC8502_00444) - 405705..406457 (+) 753 WP_006995313.1 DUF3800 domain-containing protein -

Sequence


Protein


Download         Length: 98 a.a.        Molecular weight: 11092.94 Da        Isoelectric Point: 10.3139

>NTDB_id=1141214 DQN49_RS02155 WP_005650837.1 401397..401693(+) (HI0659) [Haemophilus aegyptius strain NCTC8502]
MNKISPLGSNWNEFEQQIFNEEEIRESNLRVALIKELITSRQQLGISQKQLETLSGVKQPMIARIEKGQTNPQLETLLKL
LAPLGKTLSIVPLRVKNA

Nucleotide


Download         Length: 297 bp        

>NTDB_id=1141214 DQN49_RS02155 WP_005650837.1 401397..401693(+) (HI0659) [Haemophilus aegyptius strain NCTC8502]
ATGAATAAAATCAGCCCATTAGGTTCAAATTGGAATGAGTTTGAACAGCAAATTTTCAATGAAGAAGAAATCCGAGAAAG
TAATTTGCGTGTAGCCTTAATTAAAGAATTGATTACTTCTCGCCAGCAACTTGGGATTTCCCAAAAACAACTTGAAACCT
TAAGCGGTGTGAAGCAACCTATGATTGCTCGCATTGAAAAAGGACAAACGAATCCTCAGCTTGAAACGTTGTTAAAATTG
CTCGCTCCTTTAGGGAAAACCCTGTCGATTGTTCCTCTAAGGGTAAAAAATGCCTAA

Domains


Predicted by InterproScan.

(41-89)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB Q4QMQ7

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  HI0659 Haemophilus influenzae Rd KW20

100

100

1


Multiple sequence alignment