Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   DQN36_RS08600 Genome accession   NZ_LS483425
Coordinates   1729410..1730123 (+) Length   237 a.a.
NCBI ID   WP_002982243.1    Uniprot ID   A0A9X5LXW4
Organism   Streptococcus pyogenes strain NCTC13737     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1724410..1735123
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQN36_RS08590 (NCTC13737_01690) treC 1725479..1727107 (-) 1629 WP_111704400.1 alpha,alpha-phosphotrehalase -
  DQN36_RS08595 (NCTC13737_01691) treP 1727175..1729199 (-) 2025 WP_111704401.1 PTS system trehalose-specific EIIBC component -
  DQN36_RS08600 (NCTC13737_01692) treR 1729410..1730123 (+) 714 WP_002982243.1 trehalose operon repressor Regulator
  DQN36_RS08610 (NCTC13737_01693) - 1730403..1730740 (-) 338 Protein_1585 winged helix-turn-helix transcriptional regulator -
  DQN36_RS08615 (NCTC13737_01694) - 1730927..1731784 (+) 858 WP_111704402.1 VOC family protein -
  DQN36_RS08620 (NCTC13737_01695) yaaA 1731826..1732557 (+) 732 WP_023079177.1 peroxide stress protein YaaA -
  DQN36_RS08625 (NCTC13737_01696) nrdG 1732731..1733345 (-) 615 WP_021775544.1 anaerobic ribonucleoside-triphosphate reductase activating protein -
  DQN36_RS08630 (NCTC13737_01697) - 1733360..1733854 (-) 495 WP_031488766.1 GNAT family N-acetyltransferase -
  DQN36_RS08635 (NCTC13737_01698) - 1733863..1734798 (-) 936 WP_111704403.1 Gfo/Idh/MocA family protein -
  DQN36_RS09150 (NCTC13737_01699) - 1734827..1734973 (-) 147 WP_002982210.1 hypothetical protein -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27592.78 Da        Isoelectric Point: 9.6226

>NTDB_id=1141163 DQN36_RS08600 WP_002982243.1 1729410..1730123(+) (treR) [Streptococcus pyogenes strain NCTC13737]
MTKYERIYKDLETKINKDFYKEGDFLPTEIELSQQYQASRDTVRKALSLLTKAGLILKKQGRGTQVIKHHQIMFPISELT
SYQELVSYSNLDSKTNVIAIDKLIVDETLSKLTGFSKNSLVWRVTRQRVVEGVASVLDIDYLSKTLVPIMTREIAEHSIY
QYLEKELHLAIDFALKEVTIDQITDRDKILLDLGSDQHVVSVKSKVYLSNNNQFQFTESRHKLEKFKFLDFARRRPK

Nucleotide


Download         Length: 714 bp        

>NTDB_id=1141163 DQN36_RS08600 WP_002982243.1 1729410..1730123(+) (treR) [Streptococcus pyogenes strain NCTC13737]
ATGACAAAGTATGAACGTATTTATAAAGACCTCGAAACAAAAATAAACAAAGACTTCTACAAAGAAGGGGATTTTTTACC
TACTGAAATAGAATTGAGTCAACAATACCAAGCTAGCCGAGATACCGTCCGCAAGGCTCTCTCGCTTCTCACTAAGGCAG
GCCTTATCCTCAAAAAACAAGGACGTGGCACCCAAGTGATTAAGCATCATCAGATCATGTTCCCCATCTCAGAACTAACT
AGCTATCAGGAACTCGTCTCTTACTCAAATCTAGATTCTAAGACCAACGTCATTGCCATTGATAAACTGATTGTGGATGA
GACACTTTCAAAATTGACCGGTTTTAGCAAAAACAGCTTGGTCTGGCGTGTTACACGCCAACGCGTTGTTGAGGGTGTGG
CTTCCGTCTTAGACATTGATTACCTTAGTAAAACTTTGGTGCCAATAATGACAAGGGAAATCGCAGAGCATTCTATTTAT
CAATATTTGGAAAAGGAACTCCATCTCGCCATTGACTTTGCCCTCAAAGAGGTTACCATTGACCAAATAACCGATCGTGA
TAAAATTTTACTTGACCTTGGATCAGACCAACATGTTGTTTCCGTCAAATCCAAAGTCTACCTTTCCAATAATAACCAAT
TCCAATTCACCGAGAGTCGCCATAAACTGGAAAAATTTAAATTTTTAGATTTTGCTCGGCGCAGACCAAAATAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, gntR family (GntR)

(3-66)

UTRA domain (UTRA)

(91-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

68.803

98.734

0.679

Multiple sequence alignment