Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   DQN36_RS02230 Genome accession   NZ_LS483425
Coordinates   420669..421394 (+) Length   241 a.a.
NCBI ID   WP_111704036.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain NCTC13737     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 415669..426394
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQN36_RS02200 (NCTC13737_00434) - 415848..417308 (+) 1461 WP_002988645.1 NCS2 family permease -
  DQN36_RS02205 (NCTC13737_00435) tsaE 417462..417923 (+) 462 WP_009880751.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  DQN36_RS02210 (NCTC13737_00436) - 417898..418422 (+) 525 WP_023078656.1 GNAT family N-acetyltransferase -
  DQN36_RS02215 (NCTC13737_00437) brpA 418431..419714 (+) 1284 WP_030126322.1 biofilm formation/cell division transcriptional regulator BrpA -
  DQN36_RS02220 (NCTC13737_00438) - 419825..420181 (-) 357 WP_014407784.1 hypothetical protein -
  DQN36_RS02225 (NCTC13737_00439) - 420178..420597 (-) 420 WP_002983376.1 HIT family protein -
  DQN36_RS02230 (NCTC13737_00440) pptA 420669..421394 (+) 726 WP_111704036.1 ABC transporter ATP-binding protein Regulator
  DQN36_RS02235 (NCTC13737_00441) - 421397..422431 (+) 1035 WP_010922583.1 ABC transporter permease -
  DQN36_RS02240 (NCTC13737_00442) ccrZ 422495..423286 (+) 792 WP_111704037.1 cell cycle regulator CcrZ -
  DQN36_RS02245 (NCTC13737_00443) trmB 423286..423921 (+) 636 WP_111704038.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  DQN36_RS02255 (NCTC13737_00445) rimP 424180..424716 (+) 537 WP_002988815.1 ribosome maturation factor RimP -
  DQN36_RS02260 (NCTC13737_00446) nusA 424891..426048 (+) 1158 WP_002988817.1 transcription termination factor NusA -
  DQN36_RS02265 (NCTC13737_00447) rnpM 426064..426360 (+) 297 WP_002983486.1 RNase P modulator RnpM -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26712.76 Da        Isoelectric Point: 4.5624

>NTDB_id=1141138 DQN36_RS02230 WP_111704036.1 420669..421394(+) (pptA) [Streptococcus pyogenes strain NCTC13737]
MLNIKNLTGGYHNIPVLNDVSFSVDNGELVGLIGLNGAGKSTTINEIIGFLKPYQGSISIDGLTLAENAVAYRQKIGFIP
ETPSLYEELTLSEHINTVAMAYDIDLEVAQKRAQPFLEMFRLTDKLEWFPVNFSKGMKQKVMIICAFVIDPSLFIFDEPF
LGLDPLAISDLIQTLEVEKAKGKSILMSTHVLDSAERMCDRFVILHHGQVRAQGTLADLQEAFGDRSASLNDIYLALTKE
D

Nucleotide


Download         Length: 726 bp        

>NTDB_id=1141138 DQN36_RS02230 WP_111704036.1 420669..421394(+) (pptA) [Streptococcus pyogenes strain NCTC13737]
ATGTTAAACATTAAAAATCTAACAGGAGGATATCACAATATCCCTGTTTTAAACGATGTCTCATTTTCTGTAGACAATGG
AGAGTTAGTCGGTTTGATCGGGCTAAATGGTGCTGGAAAGTCAACAACTATCAACGAAATTATTGGCTTTTTGAAGCCTT
ATCAAGGAAGTATTTCTATTGATGGTTTAACTCTAGCAGAAAATGCAGTTGCCTACCGTCAAAAAATAGGTTTTATCCCA
GAAACTCCTAGTCTCTATGAAGAATTGACCTTATCAGAGCATATCAACACCGTAGCTATGGCTTATGATATCGACTTAGA
AGTGGCACAAAAACGAGCACAACCTTTCTTGGAAATGTTTCGTTTAACTGACAAACTTGAATGGTTTCCTGTCAATTTTT
CTAAAGGGATGAAACAAAAAGTCATGATTATTTGTGCCTTTGTCATTGATCCAAGTCTATTTATTTTTGATGAACCATTC
TTAGGGTTAGACCCTTTAGCTATTTCAGACTTAATCCAAACGCTAGAAGTCGAAAAAGCAAAAGGAAAATCTATTTTGAT
GAGTACACATGTTTTGGACTCTGCTGAAAGAATGTGTGATCGTTTTGTGATTTTGCATCATGGACAAGTTCGTGCCCAAG
GAACTCTTGCTGACTTGCAAGAAGCTTTTGGTGACCGTTCAGCGAGCTTAAATGATATCTATCTTGCATTAACAAAAGAG
GATTAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

72.803

99.17

0.722
  pptA Streptococcus thermophilus LMD-9

71.967

99.17

0.714

Multiple sequence alignment