Detailed information    

insolico Bioinformatically predicted

Overview


Name   spo0J   Type   Regulator
Locus tag   DQN31_RS09015 Genome accession   NZ_LS483421
Coordinates   1788287..1789063 (+) Length   258 a.a.
NCBI ID   WP_014407987.1    Uniprot ID   A0A4U9TLU5
Organism   Streptococcus pyogenes strain NCTC10877     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 1783287..1794063
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQN31_RS08995 (NCTC10877_01774) - 1784909..1785889 (-) 981 WP_172454448.1 IS30 family transposase -
  DQN31_RS09005 (NCTC10877_01776) rlmH 1786284..1786763 (-) 480 WP_014407985.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  DQN31_RS09010 (NCTC10877_01777) htrA 1786975..1788198 (+) 1224 WP_014407986.1 S1C family serine protease Regulator
  DQN31_RS09015 (NCTC10877_01778) spo0J 1788287..1789063 (+) 777 WP_014407987.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence


Protein


Download         Length: 258 a.a.        Molecular weight: 29042.85 Da        Isoelectric Point: 10.3100

>NTDB_id=1141078 DQN31_RS09015 WP_014407987.1 1788287..1789063(+) (spo0J) [Streptococcus pyogenes strain NCTC10877]
MTKELLIDLPIEDIVTNPYQPRIQFNQRELQDLATSIKSNGLIQPIIVRKSDIFGYELVAGERRLKASKMAGLKKVPAII
KKISTLESMQQAIVENLQRSNLNAIEEAKAYQLLVEKKHMTHDEIAKYMGKSRPYISNTLRLLQLPAPIIKAIEEGKISA
GHARALLTLSDDKQQLYLTHKIQNEGLSVRQIEQLVTSTPSSKLSKKTKNIFATSLEKQLAKSLGLSVNMKLTANHSGYL
QISFSNDDELNRIINKLK

Nucleotide


Download         Length: 777 bp        

>NTDB_id=1141078 DQN31_RS09015 WP_014407987.1 1788287..1789063(+) (spo0J) [Streptococcus pyogenes strain NCTC10877]
ATGACAAAAGAATTATTGATAGACCTACCAATTGAAGATATTGTTACAAATCCCTATCAGCCAAGGATACAATTTAATCA
AAGAGAACTCCAAGACCTAGCAACTTCTATTAAATCAAACGGCCTCATTCAACCTATTATTGTTCGAAAATCTGACATTT
TTGGCTATGAGTTAGTTGCTGGAGAACGACGACTTAAAGCTTCAAAAATGGCTGGTCTAAAAAAAGTTCCAGCTATCATC
AAGAAGATCTCTACACTCGAGAGCATGCAACAAGCTATAGTTGAAAATTTACAACGTTCTAACCTTAACGCTATCGAAGA
AGCTAAAGCCTATCAGTTATTGGTTGAAAAAAAACACATGACTCACGATGAGATTGCTAAATATATGGGAAAATCAAGAC
CTTATATTAGCAATACCTTACGTCTGTTACAACTCCCAGCACCTATCATTAAAGCAATTGAAGAAGGAAAAATTAGTGCG
GGACACGCGCGTGCTCTTTTAACTTTGAGTGATGATAAGCAACAACTGTACCTCACTCATAAAATACAAAATGAAGGCCT
AAGTGTTAGGCAAATTGAGCAACTGGTTACTTCTACTCCAAGTTCGAAGCTATCTAAAAAAACTAAAAATATTTTTGCCA
CTTCTTTAGAGAAACAATTGGCTAAATCATTGGGACTCTCTGTCAATATGAAGCTGACAGCAAACCATAGTGGGTACCTT
CAGATATCTTTTTCCAATGATGATGAATTAAACAGAATTATCAACAAGCTAAAGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A4U9TLU5

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

58.755

99.612

0.585


Multiple sequence alignment