Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   DQN31_RS06770 Genome accession   NZ_LS483421
Coordinates   1343415..1344224 (-) Length   269 a.a.
NCBI ID   WP_002985641.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain NCTC10877     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1338415..1349224
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQN31_RS06760 (NCTC10877_01340) smc 1338740..1342279 (-) 3540 WP_014407396.1 chromosome segregation protein SMC -
  DQN31_RS06765 (NCTC10877_01341) rnc 1342280..1342972 (-) 693 WP_002990670.1 ribonuclease III -
  DQN31_RS06770 (NCTC10877_01342) vicX 1343415..1344224 (-) 810 WP_002985641.1 MBL fold metallo-hydrolase Regulator
  DQN31_RS06775 (NCTC10877_01343) vicK 1344228..1345580 (-) 1353 WP_014407395.1 cell wall metabolism sensor histidine kinase VicK Regulator
  DQN31_RS06780 (NCTC10877_01344) vicR 1345573..1346283 (-) 711 WP_002985645.1 response regulator YycF Regulator
  DQN31_RS06785 (NCTC10877_01345) - 1346445..1347479 (-) 1035 WP_014407394.1 DUF3114 domain-containing protein -
  DQN31_RS06790 (NCTC10877_01346) - 1347535..1348782 (-) 1248 WP_014407393.1 AMP-binding protein -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 30095.20 Da        Isoelectric Point: 5.5314

>NTDB_id=1141065 DQN31_RS06770 WP_002985641.1 1343415..1344224(-) (vicX) [Streptococcus pyogenes strain NCTC10877]
MNESGFKYSILASGSTGNCFYLETPKKRLLIDAGLTGKKITSLLAEIDRKPEDLDAILITHEHSDHIKGVGVMARKYHLD
IYANEKTWQLMDECNMLGKLDASQKHIFQRDKVLTFGDVDIESFGVSHDAIDPQFYRIMKDNKSFVMLTDTGYVSDRMTG
IIENADGYLIESNHDIEILRSGSYPWSLKQRILSDLGHLSNEDGAGAMIRSLGYNTKKIYLGHLSKENNIKELAHMTMVN
QLAMADLAVGTDFTVHDTSPDTACPLTDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=1141065 DQN31_RS06770 WP_002985641.1 1343415..1344224(-) (vicX) [Streptococcus pyogenes strain NCTC10877]
ATGAATGAGAGTGGTTTTAAATATAGTATTTTAGCATCTGGGTCCACAGGAAATTGTTTTTATTTAGAAACACCTAAAAA
ACGCTTATTGATTGATGCAGGGCTTACTGGTAAGAAAATTACCAGTCTTCTTGCTGAAATTGACCGCAAACCTGAGGATT
TGGATGCTATTTTGATTACCCATGAGCACTCTGACCATATTAAGGGTGTAGGCGTTATGGCCCGCAAATACCATTTGGAT
ATCTATGCTAATGAAAAAACATGGCAGCTGATGGATGAGTGCAATATGCTAGGTAAGCTTGATGCCTCACAAAAACATAT
TTTCCAAAGGGATAAAGTTTTGACCTTTGGAGATGTTGATATCGAAAGTTTTGGAGTCAGCCATGACGCTATTGATCCTC
AATTTTATCGGATTATGAAAGATAATAAGTCTTTTGTGATGTTGACAGATACAGGATATGTCAGTGATAGGATGACAGGT
ATTATTGAAAATGCAGATGGCTACTTGATTGAATCCAATCATGATATTGAAATTTTGAGATCAGGCTCTTATCCTTGGAG
CTTGAAGCAGCGTATTTTATCTGATTTAGGACATTTATCAAATGAAGATGGAGCGGGAGCCATGATTAGAAGCCTGGGGT
ACAATACCAAAAAAATATACCTAGGTCATCTGAGTAAAGAAAATAACATCAAAGAGTTAGCGCATATGACGATGGTCAAT
CAACTGGCTATGGCAGATTTAGCAGTAGGTACAGACTTTACGGTCCATGATACCTCTCCAGATACTGCTTGTCCATTAAC
TGATATTTGA

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-223)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

75.836

100

0.758

Multiple sequence alignment