Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   DQN31_RS03070 Genome accession   NZ_LS483421
Coordinates   588567..589604 (+) Length   345 a.a.
NCBI ID   WP_014407697.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain NCTC10877     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 583567..594604
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQN31_RS03045 (NCTC10877_00593) - 583830..585161 (+) 1332 WP_014407700.1 dipeptidase -
  DQN31_RS03050 (NCTC10877_00594) arcC 585181..586131 (+) 951 WP_009880962.1 carbamate kinase -
  DQN31_RS03055 (NCTC10877_00595) asnA 586445..587437 (+) 993 WP_014407699.1 aspartate--ammonia ligase -
  DQN31_RS03060 (NCTC10877_00596) rsmD 587560..588099 (+) 540 WP_002983819.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  DQN31_RS03065 (NCTC10877_00597) coaD 588089..588580 (+) 492 WP_014407698.1 pantetheine-phosphate adenylyltransferase -
  DQN31_RS03070 (NCTC10877_00598) sepM 588567..589604 (+) 1038 WP_014407697.1 SepM family pheromone-processing serine protease Regulator
  DQN31_RS03075 (NCTC10877_00599) - 590030..591007 (+) 978 WP_002994809.1 LacI family DNA-binding transcriptional regulator -
  DQN31_RS03080 (NCTC10877_00600) - 591455..592075 (+) 621 WP_002992791.1 YutD family protein -
  DQN31_RS03085 (NCTC10877_00601) rlmN 592079..593158 (+) 1080 WP_002992788.1 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN -
  DQN31_RS03090 (NCTC10877_00602) - 593240..593866 (-) 627 WP_002983834.1 prepilin peptidase -

Sequence


Protein


Download         Length: 345 a.a.        Molecular weight: 37571.33 Da        Isoelectric Point: 9.6692

>NTDB_id=1141053 DQN31_RS03070 WP_014407697.1 588567..589604(+) (sepM) [Streptococcus pyogenes strain NCTC10877]
MKRLKKIKWWLVGLLALISLLLALFFPLPYYIEMPGGAYDIRTVLQVNGKEDKRKGAYQFVAVGISRASLAQLLYAWLTP
FTEISTAEDTTGGYSDADFLRINQFYMETSQNAAIYQALSLAGKPVTLDYKGVYVLDVNNESTFKGMLHLADTVTGVNGK
QFTSSAELIDYVSHLKLGDEVTVQFTSDNKPKKGVGRIIKLKNGKNGIGIALTDHTSVNSEDTVIFSTKGVGGPSAGLMF
TLDIYDQITKEDLRKGRTIAGTGTIGKDGEVGDIGGAGLKVVAAAEAGADIFFVPNNPVDKEIKKVNPNAISNYEEAKRA
AKRLKTKMKIVPVTTVQEALVYLRK

Nucleotide


Download         Length: 1038 bp        

>NTDB_id=1141053 DQN31_RS03070 WP_014407697.1 588567..589604(+) (sepM) [Streptococcus pyogenes strain NCTC10877]
ATGAAAAGACTTAAAAAAATCAAATGGTGGTTAGTGGGTCTGCTAGCTTTAATCTCTTTGTTGCTAGCGTTATTTTTTCC
GCTACCTTATTATATTGAAATGCCTGGAGGCGCTTACGATATTCGGACTGTCTTACAAGTCAATGGCAAAGAAGACAAAC
GAAAAGGAGCTTACCAGTTTGTTGCAGTGGGCATTAGTCGTGCCAGCCTCGCTCAGCTATTATATGCTTGGCTGACACCG
TTTACTGAAATTAGTACAGCAGAAGATACAACAGGCGGATACAGCGATGCTGATTTCCTTCGAATTAATCAATTTTACAT
GGAAACATCACAAAATGCAGCTATTTATCAAGCTTTATCCTTAGCTGGAAAACCAGTTACATTAGATTATAAAGGCGTAT
ATGTTTTAGACGTAAACAACGAATCTACTTTTAAAGGAATGTTACACTTAGCAGATACTGTAACAGGTGTAAATGGTAAA
CAGTTTACTAGTTCAGCAGAACTTATTGACTATGTTTCTCACCTAAAACTAGGAGATGAAGTTACGGTTCAGTTTACGAG
TGATAATAAGCCTAAAAAAGGAGTTGGCCGTATTATCAAACTGAAAAATGGGAAAAACGGGATTGGCATTGCCTTGACTG
ATCATACAAGTGTCAATTCAGAAGACACAGTGATCTTTAGTACTAAAGGAGTAGGAGGACCTAGTGCTGGTCTAATGTTT
ACTCTTGATATATATGATCAAATAACTAAAGAAGATTTACGCAAGGGCCGTACAATTGCAGGTACAGGAACTATTGGCAA
GGATGGCGAAGTAGGAGATATTGGTGGTGCAGGTCTTAAAGTAGTTGCAGCAGCTGAAGCTGGTGCAGATATATTTTTTG
TTCCGAATAATCCTGTTGATAAGGAAATTAAAAAAGTTAATCCAAATGCTATAAGTAATTACGAAGAAGCCAAACGGGCA
GCCAAACGACTAAAGACCAAAATGAAGATTGTTCCTGTTACGACTGTTCAAGAGGCACTGGTTTATCTTCGCAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

69.275

100

0.693


Multiple sequence alignment