Detailed information    

insolico Bioinformatically predicted

Overview


Name   pptA   Type   Regulator
Locus tag   DQN31_RS02235 Genome accession   NZ_LS483421
Coordinates   421996..422721 (+) Length   241 a.a.
NCBI ID   WP_002983379.1    Uniprot ID   A0A4U7HHL6
Organism   Streptococcus pyogenes strain NCTC10877     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 416996..427721
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQN31_RS02205 (NCTC10877_00432) - 417175..418635 (+) 1461 WP_002988645.1 NCS2 family permease -
  DQN31_RS02210 (NCTC10877_00433) tsaE 418789..419250 (+) 462 WP_002983367.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  DQN31_RS02215 (NCTC10877_00434) - 419225..419749 (+) 525 WP_014407786.1 GNAT family N-acetyltransferase -
  DQN31_RS02220 (NCTC10877_00435) brpA 419758..421041 (+) 1284 WP_014411892.1 biofilm formation/cell division transcriptional regulator BrpA -
  DQN31_RS02225 (NCTC10877_00436) - 421152..421508 (-) 357 WP_014407784.1 hypothetical protein -
  DQN31_RS02230 (NCTC10877_00437) - 421505..421924 (-) 420 WP_002983376.1 HIT family protein -
  DQN31_RS02235 (NCTC10877_00438) pptA 421996..422721 (+) 726 WP_002983379.1 ABC transporter ATP-binding protein Regulator
  DQN31_RS02240 (NCTC10877_00439) - 422724..423758 (+) 1035 WP_002994331.1 ABC transporter permease -
  DQN31_RS02245 (NCTC10877_00440) ccrZ 423822..424613 (+) 792 WP_002983385.1 cell cycle regulator CcrZ -
  DQN31_RS02250 (NCTC10877_00441) trmB 424613..425248 (+) 636 WP_002983387.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  DQN31_RS02260 (NCTC10877_00443) rimP 425507..426043 (+) 537 WP_002988815.1 ribosome maturation factor RimP -
  DQN31_RS02265 (NCTC10877_00444) nusA 426218..427375 (+) 1158 WP_002988817.1 transcription termination factor NusA -
  DQN31_RS02270 (NCTC10877_00445) rnpM 427391..427687 (+) 297 WP_002983486.1 RNase P modulator RnpM -

Sequence


Protein


Download         Length: 241 a.a.        Molecular weight: 26678.75 Da        Isoelectric Point: 4.5624

>NTDB_id=1141048 DQN31_RS02235 WP_002983379.1 421996..422721(+) (pptA) [Streptococcus pyogenes strain NCTC10877]
MLNIKNLTGGYHNIPVLNDVSFSVDNGELVGLIGLNGAGKSTTINEIIGFLKPYQGSISIDGLTLAENAVAYRQKIGFIP
ETPSLYEELTLSEHINTVAMAYDIDLEVAQKRAQPFLEMFRLTDKLEWFPVNFSKGMKQKVMIICAFVIDPSLFILDEPF
LGLDPLAISDLIQTLEVEKAKGKSILMSTHVLDSAERMCDRFVILHHGQVRAQGTLADLQEAFGDRSASLNDIYLALTKE
D

Nucleotide


Download         Length: 726 bp        

>NTDB_id=1141048 DQN31_RS02235 WP_002983379.1 421996..422721(+) (pptA) [Streptococcus pyogenes strain NCTC10877]
ATGTTAAACATTAAAAATCTAACAGGAGGATATCACAATATCCCTGTTTTAAACGATGTCTCATTTTCTGTAGACAATGG
AGAGTTAGTCGGTTTGATCGGGCTAAATGGTGCTGGAAAGTCAACAACTATCAACGAAATTATTGGCTTTTTGAAGCCTT
ATCAAGGAAGTATTTCTATTGATGGTTTAACTCTAGCAGAAAATGCAGTTGCCTACCGTCAAAAAATAGGTTTTATCCCA
GAAACTCCTAGTCTCTATGAAGAATTGACCTTATCAGAGCATATCAACACCGTAGCTATGGCTTATGATATCGACTTAGA
AGTGGCACAAAAACGAGCACAACCTTTCTTGGAAATGTTTCGTTTAACTGACAAACTTGAATGGTTTCCTGTCAATTTTT
CTAAAGGGATGAAACAAAAAGTCATGATTATTTGTGCCTTTGTCATTGATCCAAGTCTATTTATTCTTGATGAACCATTC
TTAGGGTTAGACCCTTTAGCTATTTCAGACTTAATCCAAACGCTAGAAGTCGAAAAAGCAAAAGGAAAATCTATTTTGAT
GAGTACACATGTTTTGGACTCTGCTGAAAGAATGTGTGATCGTTTTGTGATTTTGCATCATGGACAAGTTCGTGCCCAAG
GAACTCTTGCTGACTTGCAAGAAGCTTTTGGTGACCGTTCAGCGAGCTTAAATGATATCTATCTTGCATTAACAAAAGAG
GATTAA

Domains


Predicted by InterproScan.

(17-160)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A4U7HHL6

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

72.803

99.17

0.722

  pptA Streptococcus thermophilus LMD-9

71.967

99.17

0.714


Multiple sequence alignment