Detailed information
Bioinformatically predicted
Overview
| Name | comYH | Type | Machinery gene |
| Locus tag | DQN31_RS00700 | Genome accession | NZ_LS483421 |
| Coordinates | 105361..106314 (+) | Length | 317 a.a. |
| NCBI ID | WP_014407216.1 | Uniprot ID | - |
| Organism | Streptococcus pyogenes strain NCTC10877 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 100361..111314
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DQN31_RS00660 (NCTC10877_00132) | - | 101202..101567 (+) | 366 | WP_002986560.1 | DUF1033 family protein | - |
| DQN31_RS00665 (NCTC10877_00133) | comGA | 101660..102584 (+) | 925 | Protein_81 | competence type IV pilus ATPase ComGA | - |
| DQN31_RS00670 (NCTC10877_00134) | comYB | 102520..103554 (+) | 1035 | WP_227868709.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| DQN31_RS00675 (NCTC10877_00135) | comGC | 103556..103882 (+) | 327 | WP_014407214.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| DQN31_RS00680 (NCTC10877_00136) | comGD | 103857..104285 (+) | 429 | WP_002986548.1 | competence type IV pilus minor pilin ComGD | - |
| DQN31_RS00685 (NCTC10877_00137) | comGE | 104242..104526 (+) | 285 | WP_002987779.1 | competence type IV pilus minor pilin ComGE | - |
| DQN31_RS00690 (NCTC10877_00138) | comYF | 104519..104953 (+) | 435 | WP_014407215.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| DQN31_RS00695 (NCTC10877_00139) | comGG | 104937..105263 (+) | 327 | WP_010921801.1 | competence type IV pilus minor pilin ComGG | - |
| DQN31_RS00700 (NCTC10877_00140) | comYH | 105361..106314 (+) | 954 | WP_014407216.1 | class I SAM-dependent methyltransferase | Machinery gene |
| DQN31_RS00705 (NCTC10877_00141) | - | 106373..107569 (+) | 1197 | WP_014407217.1 | acetate kinase | - |
| DQN31_RS00710 | - | 107756..108064 (+) | 309 | WP_041174321.1 | hypothetical protein | - |
| DQN31_RS00715 (NCTC10877_00142) | proC | 108147..108917 (-) | 771 | WP_014407219.1 | pyrroline-5-carboxylate reductase | - |
| DQN31_RS00720 (NCTC10877_00143) | pepA | 108965..110032 (-) | 1068 | WP_014407220.1 | glutamyl aminopeptidase | - |
| DQN31_RS00730 (NCTC10877_00144) | - | 110497..110781 (+) | 285 | WP_002992749.1 | DUF4651 domain-containing protein | - |
| DQN31_RS00735 (NCTC10877_00145) | - | 110778..111095 (+) | 318 | WP_014407222.1 | thioredoxin family protein | - |
Sequence
Protein
Download Length: 317 a.a. Molecular weight: 36019.09 Da Isoelectric Point: 4.7205
>NTDB_id=1141035 DQN31_RS00700 WP_014407216.1 105361..106314(+) (comYH) [Streptococcus pyogenes strain NCTC10877]
MTFEKIEEAYQLLLENCQLIENDLKTHIYDAIVEQNSFYLGAEGASPQVAQNSDKLKALCLTKEEWRKAYQFLFIKAAQT
EQLQANHQFTPDAIGFILLYLLEQLSDKDSLEVFEIGSGTGNLAQTLLNNTSKSLDYVGIELDDLLIDLSASIAEIMDSS
AHFIQEDAVRPQLLKESDIVISDLPVGYYPNDDIAKRYKVASSDKHTYAHHLLMEQSLKYLKKDGFAIFLAPVNLLTSPQ
SQLLKQWLKDYAQVVALITLPDSIFGHPSNAKSIIVLQKQTDHPMETFVYPIRDLKLAENIHDFMENFKKWKLSNVN
MTFEKIEEAYQLLLENCQLIENDLKTHIYDAIVEQNSFYLGAEGASPQVAQNSDKLKALCLTKEEWRKAYQFLFIKAAQT
EQLQANHQFTPDAIGFILLYLLEQLSDKDSLEVFEIGSGTGNLAQTLLNNTSKSLDYVGIELDDLLIDLSASIAEIMDSS
AHFIQEDAVRPQLLKESDIVISDLPVGYYPNDDIAKRYKVASSDKHTYAHHLLMEQSLKYLKKDGFAIFLAPVNLLTSPQ
SQLLKQWLKDYAQVVALITLPDSIFGHPSNAKSIIVLQKQTDHPMETFVYPIRDLKLAENIHDFMENFKKWKLSNVN
Nucleotide
Download Length: 954 bp
>NTDB_id=1141035 DQN31_RS00700 WP_014407216.1 105361..106314(+) (comYH) [Streptococcus pyogenes strain NCTC10877]
ATGACTTTTGAAAAAATTGAAGAAGCTTATCAGCTGCTCTTAGAGAACTGTCAACTAATTGAAAATGATCTAAAAACACA
TATATACGATGCCATTGTTGAACAAAACTCCTTTTATTTAGGGGCTGAGGGAGCTAGTCCTCAAGTTGCTCAAAATAGTG
ATAAACTGAAAGCCTTGTGCCTGACAAAAGAAGAATGGCGTAAGGCCTACCAGTTTCTTTTTATTAAGGCAGCTCAGACG
GAGCAACTCCAAGCCAACCATCAGTTCACACCAGATGCTATTGGCTTCATTCTGCTGTATCTTTTGGAACAATTGAGTGA
TAAAGATAGCTTAGAGGTATTTGAGATTGGAAGTGGAACAGGGAACCTAGCCCAAACCCTTCTCAACAACACGAGCAAGA
GCCTTGATTATGTAGGGATTGAACTTGATGATCTCTTGATTGATCTGTCAGCCAGTATTGCTGAAATAATGGATTCTTCA
GCTCATTTTATTCAAGAAGATGCGGTAAGGCCTCAATTACTAAAAGAAAGTGACATTGTCATCAGTGACTTACCAGTTGG
TTATTATCCTAACGATGATATTGCCAAACGGTACAAGGTGGCTAGTTCAGATAAGCATACCTATGCCCATCATTTATTAA
TGGAACAGTCTTTAAAATACTTGAAAAAAGACGGTTTTGCGATTTTTCTGGCACCAGTCAATTTATTGACGAGCCCTCAG
AGCCAGTTATTGAAACAGTGGTTAAAAGATTATGCTCAGGTGGTGGCCTTGATTACGCTACCAGATTCTATTTTTGGTCA
TCCCTCAAATGCCAAGTCCATTATTGTCTTACAAAAACAAACAGACCACCCAATGGAAACCTTTGTCTATCCAATTCGGG
ATTTGAAGCTTGCAGAGAATATTCATGATTTTATGGAAAATTTCAAAAAATGGAAACTGAGTAATGTCAATTAA
ATGACTTTTGAAAAAATTGAAGAAGCTTATCAGCTGCTCTTAGAGAACTGTCAACTAATTGAAAATGATCTAAAAACACA
TATATACGATGCCATTGTTGAACAAAACTCCTTTTATTTAGGGGCTGAGGGAGCTAGTCCTCAAGTTGCTCAAAATAGTG
ATAAACTGAAAGCCTTGTGCCTGACAAAAGAAGAATGGCGTAAGGCCTACCAGTTTCTTTTTATTAAGGCAGCTCAGACG
GAGCAACTCCAAGCCAACCATCAGTTCACACCAGATGCTATTGGCTTCATTCTGCTGTATCTTTTGGAACAATTGAGTGA
TAAAGATAGCTTAGAGGTATTTGAGATTGGAAGTGGAACAGGGAACCTAGCCCAAACCCTTCTCAACAACACGAGCAAGA
GCCTTGATTATGTAGGGATTGAACTTGATGATCTCTTGATTGATCTGTCAGCCAGTATTGCTGAAATAATGGATTCTTCA
GCTCATTTTATTCAAGAAGATGCGGTAAGGCCTCAATTACTAAAAGAAAGTGACATTGTCATCAGTGACTTACCAGTTGG
TTATTATCCTAACGATGATATTGCCAAACGGTACAAGGTGGCTAGTTCAGATAAGCATACCTATGCCCATCATTTATTAA
TGGAACAGTCTTTAAAATACTTGAAAAAAGACGGTTTTGCGATTTTTCTGGCACCAGTCAATTTATTGACGAGCCCTCAG
AGCCAGTTATTGAAACAGTGGTTAAAAGATTATGCTCAGGTGGTGGCCTTGATTACGCTACCAGATTCTATTTTTGGTCA
TCCCTCAAATGCCAAGTCCATTATTGTCTTACAAAAACAAACAGACCACCCAATGGAAACCTTTGTCTATCCAATTCGGG
ATTTGAAGCTTGCAGAGAATATTCATGATTTTATGGAAAATTTCAAAAAATGGAAACTGAGTAATGTCAATTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comYH | Streptococcus mutans UA159 |
66.139 |
99.685 |
0.659 |
| comYH | Streptococcus mutans UA140 |
65.823 |
99.685 |
0.656 |