Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   DQN75_RS08475 Genome accession   NZ_LS483420
Coordinates   1684797..1685510 (+) Length   237 a.a.
NCBI ID   WP_002982243.1    Uniprot ID   A0A9X5LXW4
Organism   Streptococcus pyogenes strain NCTC13739     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1679797..1690510
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQN75_RS08465 (NCTC13739_01671) treC 1680867..1682495 (-) 1629 WP_111685287.1 alpha,alpha-phosphotrehalase -
  DQN75_RS08470 (NCTC13739_01672) treP 1682562..1684586 (-) 2025 WP_111685289.1 PTS system trehalose-specific EIIBC component -
  DQN75_RS08475 (NCTC13739_01673) treR 1684797..1685510 (+) 714 WP_002982243.1 trehalose operon repressor Regulator
  DQN75_RS08485 (NCTC13739_01674) - 1685789..1686127 (-) 339 Protein_1568 winged helix-turn-helix transcriptional regulator -
  DQN75_RS08490 (NCTC13739_01675) - 1686313..1687170 (+) 858 WP_111685291.1 VOC family protein -
  DQN75_RS08495 (NCTC13739_01676) yaaA 1687212..1687943 (+) 732 WP_111685293.1 peroxide stress protein YaaA -
  DQN75_RS08500 (NCTC13739_01677) nrdG 1688117..1688731 (-) 615 WP_002982219.1 anaerobic ribonucleoside-triphosphate reductase activating protein -
  DQN75_RS08505 (NCTC13739_01678) - 1688731..1689240 (-) 510 WP_111685295.1 GNAT family N-acetyltransferase -
  DQN75_RS08510 (NCTC13739_01679) - 1689249..1690184 (-) 936 WP_111685297.1 Gfo/Idh/MocA family protein -
  DQN75_RS09055 (NCTC13739_01680) - 1690213..1690359 (-) 147 WP_011106921.1 hypothetical protein -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27592.78 Da        Isoelectric Point: 9.6226

>NTDB_id=1141023 DQN75_RS08475 WP_002982243.1 1684797..1685510(+) (treR) [Streptococcus pyogenes strain NCTC13739]
MTKYERIYKDLETKINKDFYKEGDFLPTEIELSQQYQASRDTVRKALSLLTKAGLILKKQGRGTQVIKHHQIMFPISELT
SYQELVSYSNLDSKTNVIAIDKLIVDETLSKLTGFSKNSLVWRVTRQRVVEGVASVLDIDYLSKTLVPIMTREIAEHSIY
QYLEKELHLAIDFALKEVTIDQITDRDKILLDLGSDQHVVSVKSKVYLSNNNQFQFTESRHKLEKFKFLDFARRRPK

Nucleotide


Download         Length: 714 bp        

>NTDB_id=1141023 DQN75_RS08475 WP_002982243.1 1684797..1685510(+) (treR) [Streptococcus pyogenes strain NCTC13739]
ATGACAAAGTATGAACGTATTTATAAAGACCTCGAAACAAAAATAAACAAAGACTTTTACAAAGAAGGGGATTTTTTACC
TACTGAAATAGAATTGAGTCAACAATACCAAGCTAGCCGAGATACCGTCCGCAAGGCTCTCTCACTTCTCACAAAGGCAG
GTCTTATCCTCAAAAAACAAGGACGTGGCACCCAAGTGATTAAACATCATCAGATCATGTTCCCTATCTCAGAACTAACT
AGTTATCAGGAACTCGTCTCTTACTCAAATCTAGATTCTAAGACCAACGTCATTGCCATTGATAAACTGATTGTGGATGA
GACACTTTCAAAATTGACCGGTTTTAGCAAAAACAGCTTGGTCTGGCGTGTTACACGCCAACGCGTTGTTGAGGGTGTGG
CTTCCGTCTTAGACATTGATTACCTTAGTAAAACTTTGGTGCCAATAATGACAAGGGAAATCGCAGAGCATTCTATTTAT
CAATATTTGGAAAAGGAACTCCATCTCGCCATTGACTTTGCCCTCAAAGAGGTTACCATTGACCAAATAACCGATCGTGA
TAAAATTTTACTTGACCTTGGATCAGACCAACATGTTGTTTCCGTCAAATCCAAAGTCTACCTTTCCAATAATAACCAAT
TCCAATTCACCGAGAGTCGCCATAAACTGGAAAAATTTAAATTTTTAGATTTTGCTCGGCGCAGACCAAAATAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, gntR family (GntR)

(3-66)

UTRA domain (UTRA)

(91-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

68.803

98.734

0.679

Multiple sequence alignment