Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   DQN75_RS06775 Genome accession   NZ_LS483420
Coordinates   1340303..1341112 (-) Length   269 a.a.
NCBI ID   WP_111685074.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain NCTC13739     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1335303..1346112
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQN75_RS06765 (NCTC13739_01345) smc 1335627..1339166 (-) 3540 WP_111685072.1 chromosome segregation protein SMC -
  DQN75_RS06770 (NCTC13739_01346) rnc 1339167..1339859 (-) 693 WP_002990670.1 ribonuclease III -
  DQN75_RS06775 (NCTC13739_01347) vicX 1340303..1341112 (-) 810 WP_111685074.1 MBL fold metallo-hydrolase Regulator
  DQN75_RS06780 (NCTC13739_01348) vicK 1341116..1342468 (-) 1353 WP_002995609.1 cell wall metabolism sensor histidine kinase VicK Regulator
  DQN75_RS06785 (NCTC13739_01349) vicR 1342461..1343171 (-) 711 WP_002985645.1 response regulator YycF Regulator
  DQN75_RS06790 (NCTC13739_01350) - 1343333..1344367 (-) 1035 WP_011284595.1 DUF3114 domain-containing protein -
  DQN75_RS06795 (NCTC13739_01351) - 1344423..1345670 (-) 1248 WP_011284594.1 AMP-binding protein -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 30038.15 Da        Isoelectric Point: 5.3274

>NTDB_id=1141013 DQN75_RS06775 WP_111685074.1 1340303..1341112(-) (vicX) [Streptococcus pyogenes strain NCTC13739]
MNESGFKYSILASGSTGNCFYLETPKKRLLIDAGLTGKKITSLLAEIDRKPEDLDAILITHEHSDHIKGVGVMARKYHLD
VYANEKTWQLMDECNMLGKLDASQKHIFQRDKVLTFGDVDIESFGVSHDAIDPQFYRIMKDNKSFVMLTDTGYVSDRMTG
IIENADGYLIESNHDIEILISGSYPWSLKQRILSDLGHLSNEDGAGAMIRSLGYNTKKIYLGHLSKENNIKELAHMTMVN
QLAMADLAVGTDFTVHDTSPDTACPLTDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=1141013 DQN75_RS06775 WP_111685074.1 1340303..1341112(-) (vicX) [Streptococcus pyogenes strain NCTC13739]
ATGAATGAGAGTGGTTTTAAATATAGTATTTTAGCATCTGGGTCCACAGGAAATTGTTTTTATTTAGAAACACCTAAAAA
ACGCTTATTGATTGATGCAGGGCTTACTGGTAAGAAAATTACCAGTCTTCTTGCTGAAATTGACCGCAAACCTGAGGATT
TGGATGCTATTTTGATTACCCATGAGCACTCTGACCATATTAAGGGTGTAGGCGTTATGGCCCGCAAATACCATTTGGAT
GTCTATGCTAATGAAAAAACATGGCAGCTGATGGATGAGTGCAATATGCTAGGTAAGCTTGATGCCTCACAAAAACATAT
TTTCCAAAGGGATAAAGTTTTGACCTTTGGAGATGTTGATATCGAAAGTTTTGGAGTCAGCCATGACGCTATTGATCCTC
AATTTTATCGGATTATGAAAGATAATAAGTCTTTTGTGATGTTGACAGATACAGGATATGTCAGTGATAGGATGACAGGT
ATTATTGAAAATGCAGATGGCTACTTGATTGAATCCAATCATGATATTGAAATTTTGATATCAGGCTCTTATCCTTGGAG
CTTGAAGCAGCGTATTTTATCTGATTTAGGACATTTATCAAATGAAGATGGAGCGGGAGCCATGATTAGAAGCCTGGGGT
ACAATACCAAAAAAATATACCTAGGTCATCTGAGTAAAGAAAATAACATCAAAGAGTTAGCGCATATGACGATGGTCAAT
CAACTGGCTATGGCAGATTTAGCAGTAGGTACAGACTTTACGGTCCATGATACCTCTCCAGATACTGCTTGTCCATTAAC
TGATATTTGA

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-223)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

75.836

100

0.758

Multiple sequence alignment